PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON56383.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HSF

Protein Properties

Length: 367aa MW: 41045.7 Da PI: 4.5444

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON56383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.8	9.6e-35	41	132	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++e++ed++++ ++sws+ nsfvv+d+++f++ +Lp+yFkhsnf+SF+RQLn+YgF+kv+ ++ weF+++ F g+k+ll++ik PON56383.1 41 FLTKTFEMVEDSSTDAIVSWSRARNSFVVWDSHKFSTLLLPRYFKHSNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQKHLLKTIK 128 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ PON56383.1 129 RRRN 132 *987 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MEGVIVKEEE VTYRAGSSSS SSSNASPQPM EGLHDVGPPP FLTKTFEMVE DSSTDAIVSW 60 SRARNSFVVW DSHKFSTLLL PRYFKHSNFS SFIRQLNTYG FRKVDPDRWE FANEGFLGGQ 120 KHLLKTIKRR RNVSQSFQQQ FGTCIELGQF GVETELERLK RDRNVLMAEI VKLRQQQQDS 180 RDRVTAMEDR LLLTERKQQQ MMSFLAKALN NPTFVQQFIR RNAQRTQLLG GGGRKRRLAA 240 TSAETSREEI PAIGAVEQGL EELAAVDSEI ESLFSAALDD ESSSGGKDPA ASSSGVGCGV 300 NLDCVNETIW EELLGDDLIS GNPEEEVVVG DESELHVEVE DLASNPDDWG EDLLDLVDQM 360 GYLRSKP

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MEGVIVKEEE VTYRAGSSSS SSSNASPQPM EGLHDVGPPP FLTKTFEMVE DSSTDAIVSW  60
SRARNSFVVW DSHKFSTLLL PRYFKHSNFS SFIRQLNTYG FRKVDPDRWE FANEGFLGGQ  120
KHLLKTIKRR RNVSQSFQQQ FGTCIELGQF GVETELERLK RDRNVLMAEI VKLRQQQQDS  180
RDRVTAMEDR LLLTERKQQQ MMSFLAKALN NPTFVQQFIR RNAQRTQLLG GGGRKRRLAA  240
TSAETSREEI PAIGAVEQGL EELAAVDSEI ESLFSAALDD ESSSGGKDPA ASSSGVGCGV  300
NLDCVNETIW EELLGDDLIS GNPEEEVVVG DESELHVEVE DLASNPDDWG EDLLDLVDQM  360
GYLRSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	130	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-120	HSF family protein