PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON56373.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 518aa    MW: 56430.2 Da    PI: 8.8718
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON56373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.2e-0586108123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 + C++C+k F r  nL+ H r H
  PON56373.1  86 FICEICNKGFQRDQNLQLHRRGH 108
                 89*******************88 PP

2zf-C2H211.80.00074163185123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 +kC +C+k++  +s+ k H + +
  PON56373.1 163 WKCDKCSKRYAVQSDWKAHSKIC 185
                 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    
MMKGLMVDDN MSNLTFASGE ISASSSTRND QSAGNLYPQN SSASTNQLPP PPPPPNKKKR  60
SLPGNPDPDA EVIALSPKTL LATNRFICEI CNKGFQRDQN LQLHRRGHNL PWKLKQRSNK  120
EVIRKKVYVC PEPSCVHHDP SRALGDLTGI KKHFFRKHGE KKWKCDKCSK RYAVQSDWKA  180
HSKICGTREY RCDCGTLFSR RDSFITHRAF CDALAQESSS TSTTTARAMT AIMNPLQHQH  240
QHRHHHLSSS SSQQLVLPQN IEHHLHGGGA AIKREVVQDL IPPWLAYPPP QPPPPPSLQP  300
PQPLMQFSSP NNPNSTLLNI QTQQPPPPPP QAAASPFASA TALLQKAAQM GSTMSNRAAS  360
FLKAHQAHHY LASESNNNNN LASESNNNNN MGTASGVVSS LGLSCESIAH DHDHDQFGIG  420
NDYEEMMSSL SAVVAPPMPP PPATGINAAT PSGSSSRVGM GGDGGHGGGN EGLTRDFLGL  480
RTFPHKDIFN IVGLDHINSS AYGSDHPKHD HHQPSWQG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113126KLKQRSNKEVIRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13810.11e-114C2H2 family protein