PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON56122.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 443aa MW: 50236.2 Da PI: 7.1974

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON56122.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	76.7	3.7e-24	94	194	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdq 84 +Wt+ +v++Li a+ +++++ +++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ +++d PON56122.1 94 KWTDTMVKLLIMAVFYIGDENGSEGtdpttkkkhpggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQSLLDT 192 7************988777754335667788999999******************************************559*******99 PP trihelix 85 le 86 ++ PON56122.1 193 MD 194 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MGGGMLGLEL PLQQQQNPSN PPNPHHLSHP QMVAYAHHEP DHHPQAQPSV KHGYPFAPKL 60 KPVLALSDED EPGFAADDTS GDGKRKMSPW QRMKWTDTMV KLLIMAVFYI GDENGSEGTD 120 PTTKKKHPGG LLQKKGKWKS VSRAMMEKGF YVSPQQCEDK FNDLNKRYKR VNDILGKGTA 180 CRVVENQSLL DTMDLTPKMK EEVRKLLNSK HLFFREMCAY HNSCGHGSVS TTGGASGAHH 240 SPELASSEPS SHVQPNQQNQ QQRCLHSTDN SHVDYDDDED DEEAEGGSRG HIGHGHGDIE 300 DESYEGPHKR PRKGALSESS QLMQQLSCEI LGVIQDGSKS SWEKKHWLKT RLIQLEEQQV 360 GFQCEAFELE KQRLKWVKFS GKKEREMERA KFENEKRRLE NERMVLLIRQ KELEVLDLHH 420 RSQHQQQQHS SNKRGGEPSS ITG

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MGGGMLGLEL PLQQQQNPSN PPNPHHLSHP QMVAYAHHEP DHHPQAQPSV KHGYPFAPKL  60
KPVLALSDED EPGFAADDTS GDGKRKMSPW QRMKWTDTMV KLLIMAVFYI GDENGSEGTD  120
PTTKKKHPGG LLQKKGKWKS VSRAMMEKGF YVSPQQCEDK FNDLNKRYKR VNDILGKGTA  180
CRVVENQSLL DTMDLTPKMK EEVRKLLNSK HLFFREMCAY HNSCGHGSVS TTGGASGAHH  240
SPELASSEPS SHVQPNQQNQ QQRCLHSTDN SHVDYDDDED DEEAEGGSRG HIGHGHGDIE  300
DESYEGPHKR PRKGALSESS QLMQQLSCEI LGVIQDGSKS SWEKKHWLKT RLIQLEEQQV  360
GFQCEAFELE KQRLKWVKFS GKKEREMERA KFENEKRRLE NERMVLLIRQ KELEVLDLHH  420
RSQHQQQQHS SNKRGGEPSS ITG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	1e-72	Trihelix family protein