PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON56118.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 544aa MW: 58383 Da PI: 7.0507

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON56118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.9	6.6e-19	163	249	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a++++ ++l+rg+l++ +Weev++++ r + ++s +qCk+k +nl+kryk ++++++++ s s++p+f+++e PON56118.1 163 EWSDAAISCLLDAYTDKFTQLNRGNLRGRDWEEVAAVVseRCERQTKSVEQCKNKVDNLKKRYKLERHRMNNG-GISASHWPWFKKME 249 5***********************************665667789******************9999.566679*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MASCDDDFSL LGDESNNPSN PHHLSHAPAS HHLHQAYAPA PAHRFSASAR AAPTQPILSA 60 GSPEKVGAGE QDDGEDYGEA EAAFCSNPFE NDGDQSGSGG GGGGGGVDSR SEKRKDHGRE 120 DQLSDGGGSG GPYSYKKPKS TQPAASGNSG GGSGGEYRKD REEWSDAAIS CLLDAYTDKF 180 TQLNRGNLRG RDWEEVAAVV SERCERQTKS VEQCKNKVDN LKKRYKLERH RMNNGGISAS 240 HWPWFKKMEQ IVGNNLPIKV ASDDDKGAGS SGNTPRQSKR YAMTTGSSAG QMNNMKPKST 300 TNPKWRRVVF KISGAALAGA APNNIDSKVV MLIAREVAMA ARVGVEVAVV VGGRNFFCGD 360 TWVNTTGLDR TTAYQIGMMA TVMNSVLLQS AIEKMGVQTR VQTAFSMHEV AEPYNRHRAI 420 RHLEKGRVVI FAGIGAATGN PLFSTDTAAA FRALEIHAEA VLKGTNVDGV YDCTSQDNNF 480 TFEHISFREL VARGATLMDS MALTYCEDNR IPVVVFNLLE PGNISKALCG EQVGTLIDLT 540 GRVS

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MASCDDDFSL LGDESNNPSN PHHLSHAPAS HHLHQAYAPA PAHRFSASAR AAPTQPILSA  60
GSPEKVGAGE QDDGEDYGEA EAAFCSNPFE NDGDQSGSGG GGGGGGVDSR SEKRKDHGRE  120
DQLSDGGGSG GPYSYKKPKS TQPAASGNSG GGSGGEYRKD REEWSDAAIS CLLDAYTDKF  180
TQLNRGNLRG RDWEEVAAVV SERCERQTKS VEQCKNKVDN LKKRYKLERH RMNNGGISAS  240
HWPWFKKMEQ IVGNNLPIKV ASDDDKGAGS SGNTPRQSKR YAMTTGSSAG QMNNMKPKST  300
TNPKWRRVVF KISGAALAGA APNNIDSKVV MLIAREVAMA ARVGVEVAVV VGGRNFFCGD  360
TWVNTTGLDR TTAYQIGMMA TVMNSVLLQS AIEKMGVQTR VQTAFSMHEV AEPYNRHRAI  420
RHLEKGRVVI FAGIGAATGN PLFSTDTAAA FRALEIHAEA VLKGTNVDGV YDCTSQDNNF  480
TFEHISFREL VARGATLMDS MALTYCEDNR IPVVVFNLLE PGNISKALCG EQVGTLIDLT  540
GRVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein