PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON55922.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | CAMTA | ||||||||
Protein Properties | Length: 1095aa MW: 123008 Da PI: 5.5009 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 183.6 | 2.1e-57 | 19 | 136 | 2 | 118 |
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 l+e ++rwl++ ei++iL n++ +++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+e+n++fqrr+y PON55922.1 19 LSEaQHRWLRPAEICEILRNYQTFRISSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRSY 117 45559********************************************************************************************** PP CG-1 100 wlLeeelekivlvhylevk 118 w+Lee+l +iv+vhylevk PON55922.1 118 WMLEEDLMHIVFVHYLEVK 136 ****************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1095 aa Download sequence |
MAERGSYDLT PRLDIQQLLS EAQHRWLRPA EICEILRNYQ TFRISSEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEDNE NFQRRSYWML 120 EEDLMHIVFV HYLEVKGNRT NVGGIRETDD VSSSLREGSP QTSSSSAGHY KAPSGSTDYT 180 SPNSSCLTSL CEDADSGDIH QANSRFHSFP ESPPLQIRNG PLMNKLEVGF SVQPNSNHHE 240 GQSSIHGANY VPHFNDDRPS YSDPATSVVG SQSTLGLGSW EEILEQCTTG FNTVPSHAST 300 PPSQLAYMGV AQEPVNVVPG ELLARETAKE LHENSLPNYS NWQISFGDNL LPLPKGSLEQ 360 SSNLDLQFDL ENILFEKITP DSNLTTSYQF NTHLDQQNEK LVQNLQAQFT NTESQSSMLY 420 KSENNRPTDG NVNYAFTLRQ QLLDGEEGLK KVDSFSRWIS KELGEVDLQM QSSSGIQWST 480 VEGDAVDDSS LSPSISQDQL FTVLDFSPKW AFTDSEPEVL IIGTFLKSQQ EVAKYRWSCM 540 FGELEVPAEV LAYGILCCHA PPHRDGPVPF YVTCSNRLAC SEVREFDYKL GSTKDLEVTD 600 IYNGSTIELS LHLRLEKLLF LGSVTPTSFT FGSVTEKQNL IYKIISLKEE DESYSQVDHN 660 EKDSSQYEVK EHLLTKLMKE RLYSWLLHKA TEDGKGPNIL DGEGQGVLHL AAALGYDWAI 720 KPIVTAGVSI NFRDINGWTA LHWAAFYGRQ GPLNFILFAE QTVAFLVSLG AAPGLLTDPS 780 PEFPLGQTPA DLASANGHKG ISGFLAESSL TSYLSSLSVN DSKEDGVVEL SGLKAIQTVS 840 ERTATPTTYG EMPDSLSLKD SLTAVRNATQ AADRITQIYR MQSFEKRQLN EYGDDGLLDE 900 RALSLLAAKS SKGGASDGLA HSAAVQIQKK YRGWKKRKEF LIIRQRIVKI QAHVRGHQVR 960 KQYRAITWSV GILEKVILRW RRKGSGLRGF RHDSVNKEPN LPSMPLKEDD YDFFKEGRKQ 1020 TEERLQKALT RVKSMVQYPE GRAQYRRVLN VVQGLRETKT DTAMYDSEET TYADDDLIEI 1080 DKLLDDDTFM SIAFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 0.0 | CAMTA family protein |