PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON55796.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 515aa MW: 56038.2 Da PI: 6.6329

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON55796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.5	7.7e-06	404	442	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L PON55796.1 404 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 442 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MADEFQTSGN WWDSSRSTSR FEAGTSPSSS ALNSLGSFGW SSTTTTNNNN NNNNNNNMVD 60 IKSRSSMDSG TSSMVFHDTQ KLQQGQDSSS VAAAATAGDP GLRMMGLGLS SQAMDWNQAA 120 LLGENKAAAS ESSSFRSILL EENNMSSSSQ GNSFQQEITS SGQLQWRDQK LLLFPGDSSS 180 NDTSYKQMSR TNTTTGFSLD HHQHQHHHHE FSPQYSSGDG STVTCQQGGG LANSSSFQVD 240 SAALYGSPSA ILLQGLFGPD QATHTNPSLP YNSPNYGVMS TTSNEVLAPS SNWSSNSTNK 300 LPQFLRSSPP PLKQPSNYSH LQFSNNAPFW NAPEATAMKD VRTSFFSTLQ PQFPTTTFEE 360 KPKNISEVRD QSGGVVAKKS GNEATSNKRP RNDQNPSPLP AFKVRKEKMG DRITALQQLV 420 SPFGKTDTAS VLSEAIEYIK FLHEQVTVLS TPYMKSGASI QHQQNNSDHK SKDPEDPKQD 480 LRSRGLCLVP VASTFPVTHE TTVDFWTPTF GGTFR

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MADEFQTSGN WWDSSRSTSR FEAGTSPSSS ALNSLGSFGW SSTTTTNNNN NNNNNNNMVD  60
IKSRSSMDSG TSSMVFHDTQ KLQQGQDSSS VAAAATAGDP GLRMMGLGLS SQAMDWNQAA  120
LLGENKAAAS ESSSFRSILL EENNMSSSSQ GNSFQQEITS SGQLQWRDQK LLLFPGDSSS  180
NDTSYKQMSR TNTTTGFSLD HHQHQHHHHE FSPQYSSGDG STVTCQQGGG LANSSSFQVD  240
SAALYGSPSA ILLQGLFGPD QATHTNPSLP YNSPNYGVMS TTSNEVLAPS SNWSSNSTNK  300
LPQFLRSSPP PLKQPSNYSH LQFSNNAPFW NAPEATAMKD VRTSFFSTLQ PQFPTTTFEE  360
KPKNISEVRD QSGGVVAKKS GNEATSNKRP RNDQNPSPLP AFKVRKEKMG DRITALQQLV  420
SPFGKTDTAS VLSEAIEYIK FLHEQVTVLS TPYMKSGASI QHQQNNSDHK SKDPEDPKQD  480
LRSRGLCLVP VASTFPVTHE TTVDFWTPTF GGTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	9e-85	bHLH family protein