PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON55348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | GeBP | ||||||||
Protein Properties | Length: 212aa MW: 24282.8 Da PI: 10.776 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 54 | 4.9e-17 | 22 | 113 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 +f+ l++e+De +lL+ +++ ++ s+s ++ ++ s+ +++s+sq+++K+rrL+ K++ + ++ + ++++hd k +++++kiWg+ PON55348.1 22 QFRLLFTESDETLLLKTFLKVSKHSSPSSSTITSPNLARIRTSLGLRFSHSQIIDKLRRLRLKYHSQART-----KSLIKTPHDIKLYNIARKIWGK 113 57889****************99999999999*********************************99999.....6789****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MSTLKTKTKL PSTPSKPSSY DQFRLLFTES DETLLLKTFL KVSKHSSPSS STITSPNLAR 60 IRTSLGLRFS HSQIIDKLRR LRLKYHSQAR TKSLIKTPHD IKLYNIARKI WGKKTQHKRL 120 RHAKKEEEEP QTSRGSEGFR AESEEVSRGS PENGEVLEKG SVCLDEEKVR SVRERWMVLR 180 MEEAELMAQK AELAKEQVKL VIQAFRSSSG TS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 8e-10 | GeBP family protein |