PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON55299.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 698aa MW: 77187 Da PI: 4.9316

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON55299.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.1	1.8e-14	463	509	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h ++ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ PON55299.1 463 NHVMAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 509 799*********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MAAPPSNQLQ TMLQTAVQSV QWTYSLFWQL CPQQGILVWG DGYYNGAIKT RKTVQPMEVS 60 AEEASLQRSQ QLRELYDSLS AGETNQPSRR PCAALSPEDL TESEWFYLMC VSFSFPPGVG 120 LPGKAYTRKQ HVWLTGANEV DSKIFSRAIL AKVREDLGFI QHVKTFFVDH HQINNLLPQK 180 PALSEHSTSN PGMSSDNPRF HSPPMPDAIY ATATATEPPV AEEANQDGEG DEEDEDENID 240 DQEEVDSDSE AEMDRNNGRS ISADQNTPAT TVAVEPSELM QLDMSEDIRL GSPDDGSNNL 300 DSDFHLLAVS GQSDHRAEST KRWQFVPDPT TSNIGLPLLP SGTTDPLEDL TQDDTHYSET 360 VSSILQNQPN LWTESSSAGY VAYSAQSAFA KWTTLSDHHS SLYVSAALDS TSQWLLKYIL 420 FRVPLLHTKY RDENSPKCGG GGGGAASRPF RKGGTHQDEM SGNHVMAERR RREKLNERFI 480 ILRSLVPFVT KMDKASILGD TIEYVKQLRK KIQDLEARDV VMELDQRSPA KHGGVQQRAS 540 STGSLKEQRS GLTTEDRIRV DPTGSDRRKL RIVEGSCGAA KPRTVELSRS SLPVPQPLPP 600 PSSPTTSSSS AETSVQVSII ENDGLLELQC PYREGLLLAV MQMLKELRIE TTTVQSSLSN 660 GFFGAQLRAK VKENEIGKKA SIVEVKRAIN QIIPHNDD

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MAAPPSNQLQ TMLQTAVQSV QWTYSLFWQL CPQQGILVWG DGYYNGAIKT RKTVQPMEVS  60
AEEASLQRSQ QLRELYDSLS AGETNQPSRR PCAALSPEDL TESEWFYLMC VSFSFPPGVG  120
LPGKAYTRKQ HVWLTGANEV DSKIFSRAIL AKVREDLGFI QHVKTFFVDH HQINNLLPQK  180
PALSEHSTSN PGMSSDNPRF HSPPMPDAIY ATATATEPPV AEEANQDGEG DEEDEDENID  240
DQEEVDSDSE AEMDRNNGRS ISADQNTPAT TVAVEPSELM QLDMSEDIRL GSPDDGSNNL  300
DSDFHLLAVS GQSDHRAEST KRWQFVPDPT TSNIGLPLLP SGTTDPLEDL TQDDTHYSET  360
VSSILQNQPN LWTESSSAGY VAYSAQSAFA KWTTLSDHHS SLYVSAALDS TSQWLLKYIL  420
FRVPLLHTKY RDENSPKCGG GGGGAASRPF RKGGTHQDEM SGNHVMAERR RREKLNERFI  480
ILRSLVPFVT KMDKASILGD TIEYVKQLRK KIQDLEARDV VMELDQRSPA KHGGVQQRAS  540
STGSLKEQRS GLTTEDRIRV DPTGSDRRKL RIVEGSCGAA KPRTVELSRS SLPVPQPLPP  600
PSSPTTSSSS AETSVQVSII ENDGLLELQC PYREGLLLAV MQMLKELRIE TTTVQSSLSN  660
GFFGAQLRAK VKENEIGKKA SIVEVKRAIN QIIPHNDD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	468	473	ERRRRE
2	469	474	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	2e-84	bHLH family protein