PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON54912.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 470aa MW: 50804.4 Da PI: 8.6272

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON54912.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.1	8.9e-05	360	398	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq PON54912.1 360 RKEKLGDRIAALQQLVSPF-----GKTDTASVLMEAIGYIKFLQ 398 7788899*******998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MESANLRHQR QLPDQPVGSP PALAAPSCYG FGSNANHVWS SSPTTTTTAT STFTSYGNSN 60 PNYDGIASNS RESNITTRNN VKGHHHDHHH NINLASGPLK YSFNTVNELG FPLTSDESYT 120 GSSSTCTTAQ SAYDMHLAKI KEELSESLIP KFTEMLNGHS STNNDDYYGQ FFLRNERRDL 180 MSSTVATTTT ENLLIKALSS SQVNGNQISA DSEFDSKNIV NGTSGTSFGG LLAVGCRGQF 240 SQIYPSINIS NLNSQSSSST ISASSLGISR ISTQPLNDNI NLGVFMGSRS NHYGGLLDEM 300 HQPHSLSCGH GKGISSFNSE ITEAKRPAGS IMEPKTTQSA ASNKKPRLES RTTCPPFKVR 360 KEKLGDRIAA LQQLVSPFGK TDTASVLMEA IGYIKFLQNQ VETLSVPYKK SSRNKSNKSM 420 QRGLKEDGIE ELKRDLRSRG LCLVPLSCMS YVAGDGGGSM WPPPNFGGRA

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MESANLRHQR QLPDQPVGSP PALAAPSCYG FGSNANHVWS SSPTTTTTAT STFTSYGNSN  60
PNYDGIASNS RESNITTRNN VKGHHHDHHH NINLASGPLK YSFNTVNELG FPLTSDESYT  120
GSSSTCTTAQ SAYDMHLAKI KEELSESLIP KFTEMLNGHS STNNDDYYGQ FFLRNERRDL  180
MSSTVATTTT ENLLIKALSS SQVNGNQISA DSEFDSKNIV NGTSGTSFGG LLAVGCRGQF  240
SQIYPSINIS NLNSQSSSST ISASSLGISR ISTQPLNDNI NLGVFMGSRS NHYGGLLDEM  300
HQPHSLSCGH GKGISSFNSE ITEAKRPAGS IMEPKTTQSA ASNKKPRLES RTTCPPFKVR  360
KEKLGDRIAA LQQLVSPFGK TDTASVLMEA IGYIKFLQNQ VETLSVPYKK SSRNKSNKSM  420
QRGLKEDGIE ELKRDLRSRG LCLVPLSCMS YVAGDGGGSM WPPPNFGGRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	3e-54	bHLH family protein