PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54802.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Trihelix
Protein Properties Length: 333aa    MW: 36921.1 Da    PI: 6.0277
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.93.7e-2542136186
    trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rWt+qe+l+Li+++   e++ rr +         + +p+W++vs+++r +g++r+p+qC+++w+nl+++ykkike+e +r+++s s +++ ++l+
  PON54802.1  42 RWTRQEILVLIQGKWVAESKNRRIRtagaafgsgQVEPKWASVSSYCRMHGVNRGPVQCRKRWSNLAGDYKKIKEWELQRKDGSDSFWAMRNDLR 136
                 8*************99998888743344566666**********************************************999999999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MALEQLSLHT TNLVDGEPNG VDARPPSTDG GDDGSRAPRL PRWTRQEILV LIQGKWVAES  60
KNRRIRTAGA AFGSGQVEPK WASVSSYCRM HGVNRGPVQC RKRWSNLAGD YKKIKEWELQ  120
RKDGSDSFWA MRNDLRRERK LPGFFDKEVY DILDAGSGAT QKTALVVAPP APEEEKEPGT  180
DEPEVTVAMF DSRRGATAED GMFSDFEQDD SGRSPEKELP ASKEGPETSK GIPAMPISGA  240
ANEKQPASNP EIGSTSHEGR KRKRFVFDGD DETSLQNQLI DVLERNGKVL ASHLDAQNTH  300
YQLDREQRKS HTDSLVAVLN KLADALVRIS EKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-111Trihelix family protein