PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54767.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 850aa    MW: 93359.5 Da    PI: 6.454
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.4e-182381357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  PON54767.1 23 KYVRYTPEQVEALERVYLECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 81
                6789*****************************************************97 PP
2START169.81.9e-531723792204
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d+  W ++++ +++l vi +g  g+++l ++++
  PON54767.1 172 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKDRTSWFRDCRCVDVLSVIPTGngGTIELVYMQT 269
                 68999*****************************************************.8888888888****************************** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l++ Rdf+++Ry+ +l++ ++vi+++S++ ++  p    ss +vR+e+lpSg+li+p+++g+s +++v+hvdl++++++++lr+l++s+ + ++
  PON54767.1 270 YAPTTLAAaRDFWTLRYTTSLEDNSLVICERSLTTTTGGPAgppSSCFVRVEMLPSGLLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQ 368
                 *************************************99998889****************************************************** PP

                 HHHHHHTXXXX CS
       START 194 ktwvatlqrqc 204
                 k++ a+l++ +
  PON54767.1 369 KMTIAALRHIR 379
                 ******99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 850 aa     Download sequence    
MALVMHKDSS TNSINNKQMD TSKYVRYTPE QVEALERVYL ECPKPSSLRR QQLIRECPIL  60
SNIEPKQIKV WFQNRRCREK QRKEASRLQT VNRKLTAMNK LLMEENDRLQ KQVSHLVYEN  120
GYMRNQLQTA SGTTTDNSCE SVVMSGQNQQ QQNPTPQQPQ RDANNPAGLL AIAEETLAEF  180
LSKATGTAVD WVQMIGMKPG PDSIGIVAVS RNCSGVAARA CGLVSLEPTK VAEILKDRTS  240
WFRDCRCVDV LSVIPTGNGG TIELVYMQTY APTTLAAARD FWTLRYTTSL EDNSLVICER  300
SLTTTTGGPA GPPSSCFVRV EMLPSGLLIR PCEGGGSIIH IVDHVDLDAW SVPEVLRPLY  360
ESSKILAQKM TIAALRHIRQ IAQESSGEIQ YGGGRQPAVL RTFSQRLCRG FNDAVNGFAD  420
DGWSLLGSDG VEDVTIVVNP SSNKFLGSQY SASIFPTFGG VLCAKASMLL QNVPPALLVR  480
FLREHRSEWA DYGVDAYSAS CLKASPYAIP CARPGGFPSS QVILPLAHTV EHEEFLEVVR  540
LEGHAFSPEE VALARDMYLL QLCSGVDENA VGSCAQLVFA PIDESFADEA PLLPSGFRVI  600
PLDPKADMPG ATRTLDLAST LEVGSGSARP ASEANPNSYN LRSVLTIAFQ FTFENHTRDN  660
VAAMARQYVR SVVGSVQRVA MAIAPSRLSS HLGPKPLPQS PEALTLAQWI CRSYRIHTGG  720
DIFQVDSPSG DAVLKRLWHH SNAIMCCSVK TNASPVFTFA NQAGLDMLET TLVALQDIML  780
DKILDEAGRK FLCSEFSKIM QQGFAYLPAG ICVSSMGRAV SYEQAVAWKV LNDEDSNHCL  840
AFMFMNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein