PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON54434.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 512aa MW: 56322.1 Da PI: 9.3052

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON54434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	94	116	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H PON54434.1 94 FVCEICNKGFQRDQNLQLHRRGH 116 89*******************88 PP
2	zf-C2H2	12.1	0.00058	170	192	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ PON54434.1 170 WKCEKCSKIYAVQSDWKAHSKTC 192 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MFSAAMSNST SNLSEEASVS SGNRVHDFGG IFIHNNNPVQ VSTFSDHNNH SNINDPHDQQ 60 PQKIKKKRSL PGNPDPDAEV IALSPKTLLA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW 120 KLKQRNSKEI KKRAYVCPEP TCVHHNPSRA LGDLTGIKKH YCRKHGEKKW KCEKCSKIYA 180 VQSDWKAHSK TCGTKEYRCD CGTLFSRKDS FITHRAFCDA LAEESARLSA AGANPAVSIQ 240 PLFPFSTVHH HHNFANPPPP IHIWDPPPPP PPPPSHHNPN PSTTHHHHHH HQPPPLLHMI 300 KPEAHHFAAP APPPPLIFQD PPPPQPRAEA EPRKGLIASP FQALHVSSHS AATSPHLSAT 360 ALLQKAATVG AVATGPAHHQ GQYTQSVGHV TAFGRPVGRH VMNNDQFLLG RTGLTPGDLA 420 TWRKTDRLTR DFLGLTADGN SSNNNTIGRG DHGHSNLGNG AVNVSVNVKD MLTYAGGVEF 480 VGPYDQRDHN SLLRPQQVFG FAEATSQTWA DC

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MFSAAMSNST SNLSEEASVS SGNRVHDFGG IFIHNNNPVQ VSTFSDHNNH SNINDPHDQQ  60
PQKIKKKRSL PGNPDPDAEV IALSPKTLLA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW  120
KLKQRNSKEI KKRAYVCPEP TCVHHNPSRA LGDLTGIKKH YCRKHGEKKW KCEKCSKIYA  180
VQSDWKAHSK TCGTKEYRCD CGTLFSRKDS FITHRAFCDA LAEESARLSA AGANPAVSIQ  240
PLFPFSTVHH HHNFANPPPP IHIWDPPPPP PPPPSHHNPN PSTTHHHHHH HQPPPLLHMI  300
KPEAHHFAAP APPPPLIFQD PPPPQPRAEA EPRKGLIASP FQALHVSSHS AATSPHLSAT  360
ALLQKAATVG AVATGPAHHQ GQYTQSVGHV TAFGRPVGRH VMNNDQFLLG RTGLTPGDLA  420
TWRKTDRLTR DFLGLTADGN SSNNNTIGRG DHGHSNLGNG AVNVSVNVKD MLTYAGGVEF  480
VGPYDQRDHN SLLRPQQVFG FAEATSQTWA DC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-104	C2H2 family protein