PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54133.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family M-type_MADS
Protein Properties Length: 325aa    MW: 36741.4 Da    PI: 6.793
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.17.1e-211053245
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                + en+  rq t++kR++gi+KKA+ELS+LCd+++ +++fs+tgk
  PON54133.1 10 KLENTNGRQATYAKRKHGIMKKANELSILCDIDIILLMFSPTGK 53
                6799**************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MGRVKLKIKK LENTNGRQAT YAKRKHGIMK KANELSILCD IDIILLMFSP TGKPSLCSGK  60
RSIEEVIAKF AQLTPQERAK RKLESLEELS NQAMLFQTQL SEINKRLSYW TNPDKIDSVE  120
HLGQMENSLR ESLNQIRSHK EILQKQQFMS LDCSTQFQNG IHIPFRVGAE QQLQPLSWIP  180
NNDSQNIVLP DDPSLLSHRE LECSTSSSFG SYSGYFGMGR NPEISNSGQE NGMVSALSRT  240
TPMSLQLGGG QFPYVPYNLN VLNDPKFQPQ TEINPQENAV DYHVNGNFEV PRHGYETNHQ  300
DNWASTSGPY AVSILDETLY PQHPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.25e-73M-type_MADS family protein