PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54051.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 526aa    MW: 60187.2 Da    PI: 10.0153
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54051.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.11.2e-1622112299
                 EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 fk+   +d+l+ + l +p+kf++++g  ++ s+ ++++ + g +We+kl  rk +++++l +GW eFvk   +  g +++F++ g+sef  +  +f++
  PON54051.1  22 FKII-LEDTLQDNKLQVPRKFLSKCG--ETLSTSVSIKLPCGSRWEMKL--RKDDDKFWLDQGWPEFVKHYSIGRGHMLTFRYYGNSEF--HAVIFDT 112
                 4444.478999999***********9..559999***************..**********************************9999..7777765 PP
2B357.72.2e-18232329198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ffkv +++++   + l++p +f  ++ + k++s  ++l+ ++g ++W vk+ +  +k+ +  +++GWk F+++n+Lk+gD++vF l ++ +f++ v +f
  PON54051.1 232 FFKVVMQPYYVLGKFLSIPANFE-NIYL-KNRSDNVILKVPNGeKTWPVKYVFgVQKRTAPRFRRGWKAFAQDNNLKVGDVCVFILLKEIKFSFEVVIF 328
                 899999999999999*******4.4433.457779*****9999*******99655556699***********************99999999999999 PP

                 - CS
          B3  98 r 98 
                 r
  PON54051.1 329 R 329
                 8 PP
3B346.85.2e-154184911896
                 --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 +p   a +h +++ +  +++l +++grsW+ ++  r ++ + v+ +GWkeFv +ngL++gD++ F+l + ++  + v++
  PON54051.1 418 VPLALAVRHIMNE-G--DVVLSTPNGRSWSAQF--RMRKFAAVICSGWKEFVADNGLEVGDVCNFELLDGTKILFQVSI 491
                 5666666664442.2..7***************..8888889************************8765444455555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    
MSRSCRGDSD EPKFLSGTPH FFKIILEDTL QDNKLQVPRK FLSKCGETLS TSVSIKLPCG  60
SRWEMKLRKD DDKFWLDQGW PEFVKHYSIG RGHMLTFRYY GNSEFHAVIF DTSTVEIDYP  120
SVPFHFDESS IDGKLREPKR EVIDGDFVEM LDDFSPCHKA GLKMSLPLSR PPKRMKTSPT  180
GKSGSPARSG RHKSNPIRKR KFEILRRVRT LDRRERLAAL QRTCGFGSEL PFFKVVMQPY  240
YVLGKFLSIP ANFENIYLKN RSDNVILKVP NGEKTWPVKY VFGVQKRTAP RFRRGWKAFA  300
QDNNLKVGDV CVFILLKEIK FSFEVVIFRV GGSLEAPISP AHDETGMPSF RENFHAKQAN  360
GCKSTPWKTS QNTEPQVVRK PYPLAFEKVR ILEKAPFQSE KPYFRVVIQP SYKWNVHVPL  420
ALAVRHIMNE GDVVLSTPNG RSWSAQFRMR KFAAVICSGW KEFVADNGLE VGDVCNFELL  480
DGTKILFQVS IVRVSDDYKG QESQAGDFAK GKDKPKVDEA VKLETD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-46B3 family protein