PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON54045.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Protein Properties

Length: 504aa MW: 57407.8 Da PI: 10.312

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON54045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.3	1e-16	22	111	2	98
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 fk+ +d+l+++ l++pk+f++++g k+ s ++++ + g +W++kl + ++++++l +GW eFv+ + g ++F+++g+s+f +v vf+ PON54045.1 22 FKII-LEDTLRENKLRVPKDFVKKCG--KTLSNSVSVKLPCGSEWKMKL--TEYDNKVWLDNGWPEFVEHYSIGRGYLLTFRYEGNSQF--HVVVFD 111 4444.489999999*********9..558999***********..******************************99..888876 PP
2	B3	62.4	7.6e-20	277	374	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ffk+l+++++ +rl+++ +fae++ k++s+ ++l+ ++gr+W+v+++ +k + + + +GWkeFv+ n++++gD++vF l g + e+ v + PON54045.1 277 FFKILMQPSYVHGSRLTISPTFAERYI--KRKSRNVILKVLDGRTWSVRYTLgvyDKIK-TARFWSGWKEFVRNNNIEVGDVCVFVLLGGIKIEFEVII 372 99*********************96..456778***********886644433.456779******************9987666677777 PP E- CS B3 97 fr 98 fr PON54045.1 373 FR 374 76 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MPSGPREDSN KPTFSSRNPH FFKIILEDTL RENKLRVPKD FVKKCGKTLS NSVSVKLPCG 60 SEWKMKLTEY DNKVWLDNGW PEFVEHYSIG RGYLLTFRYE GNSQFHVVVF DITTVEIDYP 120 SGPIHFDESN IDGKLREPKR EVISDDFVDI VDDCSPCRKT RVKSSLPCSP PSKRMKTGPT 180 GRTQSNLSRP GAKCSHRDGT FVQNRMGRGN SENSEPDMKG MGNFIELLWK HDLVATSYVD 240 KSRQKTSKIL GRMKPFKGNE KYAALLKASG FKSRRPFFKI LMQPSYVHGS RLTISPTFAE 300 RYIKRKSRNV ILKVLDGRTW SVRYTLGVYD KIKTARFWSG WKEFVRNNNI EVGDVCVFVL 360 LGGIKIEFEV IIFRVNGNSK NPMSQAHKGG AILKKPEQSL TNESKSGATV SDETGMPLSH 420 KNLPSKQVNG CISTPWKTGK RHSSNFIEKA RTSKRAPFES EIPFFKIVIK SSYSYTGDVY 480 HLVSFSAKRF VTFNPNCEHI LLFE

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MPSGPREDSN KPTFSSRNPH FFKIILEDTL RENKLRVPKD FVKKCGKTLS NSVSVKLPCG  60
SEWKMKLTEY DNKVWLDNGW PEFVEHYSIG RGYLLTFRYE GNSQFHVVVF DITTVEIDYP  120
SGPIHFDESN IDGKLREPKR EVISDDFVDI VDDCSPCRKT RVKSSLPCSP PSKRMKTGPT  180
GRTQSNLSRP GAKCSHRDGT FVQNRMGRGN SENSEPDMKG MGNFIELLWK HDLVATSYVD  240
KSRQKTSKIL GRMKPFKGNE KYAALLKASG FKSRRPFFKI LMQPSYVHGS RLTISPTFAE  300
RYIKRKSRNV ILKVLDGRTW SVRYTLGVYD KIKTARFWSG WKEFVRNNNI EVGDVCVFVL  360
LGGIKIEFEV IIFRVNGNSK NPMSQAHKGG AILKKPEQSL TNESKSGATV SDETGMPLSH  420
KNLPSKQVNG CISTPWKTGK RHSSNFIEKA RTSKRAPFES EIPFFKIVIK SSYSYTGDVY  480
HLVSFSAKRF VTFNPNCEHI LLFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-43	B3 family protein