PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON53641.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

GRF

Protein Properties

Length: 386aa MW: 43851.5 Da PI: 7.6846

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON53641.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78	9e-25	77	120	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrg++rsrk++e PON53641.1 77 DPEPGRCRRTDGKKWRCSKEAFPDSKYCERHMHRGKNRSRKPVE 120 79***************************************987 PP
2	QLQ	57.6	3.8e-20	8	42	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+l++Ky++++ P+Pp+L++ i+ PON53641.1 8 PFTASQWQELEHQALIFKYMVSGIPIPPDLIFTIK 42 8*****************************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MSGKNRFPFT ASQWQELEHQ ALIFKYMVSG IPIPPDLIFT IKRSYMDSAV LPSKLFPHHS 60 QHVGWNCFQM GLGRKIDPEP GRCRRTDGKK WRCSKEAFPD SKYCERHMHR GKNRSRKPVE 120 VLKTTTGTNP NSNSKPNPSS VTPTLVSSIT KTLSNNSRSS LSSLPSEAQN RGHLHPSCFH 180 NPHLDHHSLD LYHHCSSCSR PPGLVLSSQD SNTSLLFDSG SYSNADLRSR YVYGLKEEVD 240 EHSFFSEEPS GTHVRDLSMD DTWQFTPLTM SCSSSSSKQR NFSGSQNEHS YLQLQSSTHG 300 YKQHNEQDQQ HCDLMGNDVK MERKEETQKT IHFFDEWPVK EKDSWLDLDD KSSNSGSVST 360 TQLSISIPTS SYDFPIFNTS RTHNGD

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MSGKNRFPFT ASQWQELEHQ ALIFKYMVSG IPIPPDLIFT IKRSYMDSAV LPSKLFPHHS  60
QHVGWNCFQM GLGRKIDPEP GRCRRTDGKK WRCSKEAFPD SKYCERHMHR GKNRSRKPVE  120
VLKTTTGTNP NSNSKPNPSS VTPTLVSSIT KTLSNNSRSS LSSLPSEAQN RGHLHPSCFH  180
NPHLDHHSLD LYHHCSSCSR PPGLVLSSQD SNTSLLFDSG SYSNADLRSR YVYGLKEEVD  240
EHSFFSEEPS GTHVRDLSMD DTWQFTPLTM SCSSSSSKQR NFSGSQNEHS YLQLQSSTHG  300
YKQHNEQDQQ HCDLMGNDVK MERKEETQKT IHFFDEWPVK EKDSWLDLDD KSSNSGSVST  360
TQLSISIPTS SYDFPIFNTS RTHNGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-56	GRF family protein