PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON53274.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 170aa MW: 19265 Da PI: 7.747 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.1 | 1.4e-20 | 23 | 74 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrdps +g +r +lg+f+taeeAa+a+++a+ +++g+ PON53274.1 23 RYRGVRRRP-WGKYAAEIRDPSRQG--ARLWLGTFDTAEEAARAYDRAAFNFRGH 74 6********.**********96543..*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MEDPHDDNRR DQDQQEKGKE DVRYRGVRRR PWGKYAAEIR DPSRQGARLW LGTFDTAEEA 60 ARAYDRAAFN FRGHLAILNF PNEYYARVMG SPPYPPHISF SGNSGGSSSS SYSPSVGRGS 120 SSSPRNFEMG DSSSRSSAAA QRQERQVFEF EYLDDKVLED LLDSEKGKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 8e-36 | ERF family protein |