PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON51997.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MIKC_MADS
Protein Properties Length: 229aa    MW: 25938.5 Da    PI: 9.9774
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON51997.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.48.1e-28959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien +nrqvt+skRr+g++KKA ELS+LCd +v+++i+s tgkl+ey+s
  PON51997.1  9 KRIENATNRQVTYSKRRKGLFKKADELSILCDSKVSLLILSGTGKLHEYIS 59
                79***********************************************86 PP

2K-box821.3e-2771165195
       K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                 yq+++g +l++a++e +q++l+kLk+++++L+r++R++ Ge++++L++ eL  L q++e +++ +R++K++++ +qi+++ kk k+++++n+aL 
  PON51997.1  71 YQRTTGIDLWSAQYEGMQENLKKLKEKNRSLRRQIRQRRGEGVDNLDFGELLALDQEMEAAVQLVRERKYKVMSNQIDTTNKKLKQAKQINRALL 165
                 78899999************************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MARGKIQIKR IENATNRQVT YSKRRKGLFK KADELSILCD SKVSLLILSG TGKLHEYISP  60
STTTKQVIDQ YQRTTGIDLW SAQYEGMQEN LKKLKEKNRS LRRQIRQRRG EGVDNLDFGE  120
LLALDQEMEA AVQLVRERKY KVMSNQIDTT NKKLKQAKQI NRALLTDGIN DDSDYGLVDA  180
GGDYDSVTGY SNGIPGVFAL RLQPNQPTLH NDAESVLTSC LSSNWRVKI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
191109LKKLKEKNRSLRRQIRQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.12e-74MIKC_MADS family protein