PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON51928.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family ARF
Protein Properties Length: 809aa    MW: 90706.2 Da    PI: 6.896
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON51928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3758.6e-24129230199
                 EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+k+lt sd++++g +++ k++a+e+     ++k++ +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+v
  PON51928.1 129 FCKTLTASDTSTHGGFSVLKRHADEClprldMSKQPPHQELVAKDLHGNEWRFRHIFRGHPKRHLLQSGWSLFVSSKKLIAGDAFIFL--RGENGELRV 225
                 99*****************************444455669************************************************..449999*** PP

                 EEE-S CS
          B3  95 kvfrk 99 
                 +v+r+
  PON51928.1 226 GVRRA 230
                 **996 PP
2Auxin_resp111.86.6e-37255337183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+st+++F+v+Y+Pr+s++eF+++v+++++++k+++ +GmRf m+fe+e++ e+r+sGtv+g++d+dpvrW++SkWr+Lk
  PON51928.1 255 AWHAVSTGTMFTVYYKPRTSPAEFIIPVAEYMESIKNNYPIGMRFGMKFEGEEALEQRFSGTVIGTEDADPVRWTGSKWRCLK 337
                 89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 809 aa     Download sequence    
MMMECNSNIC DNNNDDEDTL FKELWRACAG PLVTVPSRGH QVFYFPQGHI EQVEASTNQV  60
VDQQMPAYDL SPKILCRVIN VQLKAELDTD EVFAQVTLLP EDKQDGNLAV KESSLPSSPS  120
PPRPRVYSFC KTLTASDTST HGGFSVLKRH ADECLPRLDM SKQPPHQELV AKDLHGNEWR  180
FRHIFRGHPK RHLLQSGWSL FVSSKKLIAG DAFIFLRGEN GELRVGVRRA MRQPSNVSSS  240
VISSQSMHIG VLATAWHAVS TGTMFTVYYK PRTSPAEFII PVAEYMESIK NNYPIGMRFG  300
MKFEGEEALE QRFSGTVIGT EDADPVRWTG SKWRCLKVRW DENSPVHRPE RVSPWKIEPV  360
STHAPDTLPG CHVKRSRVSI SSSITSSLHA TEGSSKINLE TSTRNEFSRA FQGQDLSTLS  420
GVFPQNHESD AENVTLLSPL QGKDERDALF GKRRLAPEDR VTQIRLGPQY MNEMFDSRAL  480
QESYNPGWPL VLQNTANVNE LWKKASDRES IFDLSANLAS SMHLSSSSKI MEHNKQPPGG  540
EVNESQNPNP ANSKYGGMHG LEVKQQKGNW LSPLLQTSHA ENSNPLAILN MENLPMQQDL  600
IANENGKRKL FGISLVGNPV MAGYGPQGPT GVASEHHRDL GSPQARISKF SERTSGRVEK  660
GKRFQVLKQF SRDSQVNLQG GSTRSCIKVH KQGTALGRSV DLSKFNGYNE LIAELDQIFE  720
FNGELIEPKR NWLIVFTDDE GDMMLVGDDP WEEFCHLVRK ISIYTREEVK KMDLQKTNPK  780
QDVISVIVAD QRIGSEEDQS FDHPCAARP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein