PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON51734.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 767aa MW: 85241.9 Da PI: 6.2

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON51734.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.6e-05	98	120	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 kC +C++ F ++ n++rHir+ H PON51734.1 98 KCDKCSQEFCSPINYRRHIRVdH 120 7*******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 767 aa Download sequence
MTIAKLEAAN NPDVMNSEEG NGSVDAIRKE TFPNFPWAGD SSVQFIQLLH ALEQQGASSR 60 LEALSNPTVS GKDEAHGYLS DHHQSWPLVS PLKIQPQKCD KCSQEFCSPI NYRRHIRVDH 120 RSKKLDKDST QNRDMLGRFW DKLSLEDAKE VVSLKNVTLE EVSGSSIINA LSSHVRKSGF 180 LSPRHPYLKA GSDLLDIVQG RPSRFPISSQ ELFAVLDRAS ENTFLSGSAV SMQRYVFDGE 240 VGKIGLETKN LVACTSYLLE QQLVKAWIAD KNAEVLRFQK LLVEEEEAAR KKQAEVLEKK 300 KQKKLRQKER KAKDQRHGEK ADIDDSIAQG LVAMLQAETS SQVDCDSHID TPDMADQIPS 360 SIFEQFNSDG NLNPEFQLVS DVEHVEEQSQ GEKADIDESV DQGLVIMPQA ETSSQVECDS 420 HIDTPDMPNR IPSSVVEHSN YDGNLDPEFQ TRSDGAGVDS GNNSSGDWQF VQASGRRRWR 480 QQASPKSQWV LSTSHHAAQS SQASKLGVQQ NRGTHWDPRT ATTARKVWNQ KAKPDTEGDT 540 LKARLQKEAL NEQDQIKNRE VLIGSVSVTL RTCSQEGNNL SKACDTESQM PKNSVQVKPN 600 NPADPVRSGT SRPTVKFWRP KKWKGIEVTI PIQDSSRASE GDNNAEKGHT GILCSTEIGN 660 SEITSDAVKA FLAERWKETT TADHVRLVLT PDSEPIDLPD IESDTQETGS LTLKFHRRSI 720 LGDAENRLVN VHIIGCPTAG VTKAKFRTES EKGVKKKDNP KERTTPT

Sequence ? help Back to Top

Protein Sequence Length: 767 aa Download sequence

MTIAKLEAAN NPDVMNSEEG NGSVDAIRKE TFPNFPWAGD SSVQFIQLLH ALEQQGASSR  60
LEALSNPTVS GKDEAHGYLS DHHQSWPLVS PLKIQPQKCD KCSQEFCSPI NYRRHIRVDH  120
RSKKLDKDST QNRDMLGRFW DKLSLEDAKE VVSLKNVTLE EVSGSSIINA LSSHVRKSGF  180
LSPRHPYLKA GSDLLDIVQG RPSRFPISSQ ELFAVLDRAS ENTFLSGSAV SMQRYVFDGE  240
VGKIGLETKN LVACTSYLLE QQLVKAWIAD KNAEVLRFQK LLVEEEEAAR KKQAEVLEKK  300
KQKKLRQKER KAKDQRHGEK ADIDDSIAQG LVAMLQAETS SQVDCDSHID TPDMADQIPS  360
SIFEQFNSDG NLNPEFQLVS DVEHVEEQSQ GEKADIDESV DQGLVIMPQA ETSSQVECDS  420
HIDTPDMPNR IPSSVVEHSN YDGNLDPEFQ TRSDGAGVDS GNNSSGDWQF VQASGRRRWR  480
QQASPKSQWV LSTSHHAAQS SQASKLGVQQ NRGTHWDPRT ATTARKVWNQ KAKPDTEGDT  540
LKARLQKEAL NEQDQIKNRE VLIGSVSVTL RTCSQEGNNL SKACDTESQM PKNSVQVKPN  600
NPADPVRSGT SRPTVKFWRP KKWKGIEVTI PIQDSSRASE GDNNAEKGHT GILCSTEIGN  660
SEITSDAVKA FLAERWKETT TADHVRLVLT PDSEPIDLPD IESDTQETGS LTLKFHRRSI  720
LGDAENRLVN VHIIGCPTAG VTKAKFRTES EKGVKKKDNP KERTTPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	298	305	EKKKQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	4e-85	C2H2 family protein