PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON51734.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 767aa MW: 85241.9 Da PI: 6.2 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.9 | 7.6e-05 | 98 | 120 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 kC +C++ F ++ n++rHir+ H PON51734.1 98 KCDKCSQEFCSPINYRRHIRVdH 120 7*******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 767 aa Download sequence |
MTIAKLEAAN NPDVMNSEEG NGSVDAIRKE TFPNFPWAGD SSVQFIQLLH ALEQQGASSR 60 LEALSNPTVS GKDEAHGYLS DHHQSWPLVS PLKIQPQKCD KCSQEFCSPI NYRRHIRVDH 120 RSKKLDKDST QNRDMLGRFW DKLSLEDAKE VVSLKNVTLE EVSGSSIINA LSSHVRKSGF 180 LSPRHPYLKA GSDLLDIVQG RPSRFPISSQ ELFAVLDRAS ENTFLSGSAV SMQRYVFDGE 240 VGKIGLETKN LVACTSYLLE QQLVKAWIAD KNAEVLRFQK LLVEEEEAAR KKQAEVLEKK 300 KQKKLRQKER KAKDQRHGEK ADIDDSIAQG LVAMLQAETS SQVDCDSHID TPDMADQIPS 360 SIFEQFNSDG NLNPEFQLVS DVEHVEEQSQ GEKADIDESV DQGLVIMPQA ETSSQVECDS 420 HIDTPDMPNR IPSSVVEHSN YDGNLDPEFQ TRSDGAGVDS GNNSSGDWQF VQASGRRRWR 480 QQASPKSQWV LSTSHHAAQS SQASKLGVQQ NRGTHWDPRT ATTARKVWNQ KAKPDTEGDT 540 LKARLQKEAL NEQDQIKNRE VLIGSVSVTL RTCSQEGNNL SKACDTESQM PKNSVQVKPN 600 NPADPVRSGT SRPTVKFWRP KKWKGIEVTI PIQDSSRASE GDNNAEKGHT GILCSTEIGN 660 SEITSDAVKA FLAERWKETT TADHVRLVLT PDSEPIDLPD IESDTQETGS LTLKFHRRSI 720 LGDAENRLVN VHIIGCPTAG VTKAKFRTES EKGVKKKDNP KERTTPT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 298 | 305 | EKKKQKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25610.1 | 4e-85 | C2H2 family protein |