PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON51320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB_related | ||||||||
Protein Properties | Length: 61aa MW: 7405.55 Da PI: 9.6927 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.1 | 2e-08 | 2 | 40 | 5 | 45 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++E++l+ + k+ G + W++Ia +++ gR ++++ +w+ PON51320.1 2 SEQEEDLIFRMYKLVGDR-WALIAGRVP-GRKAEEIERFWL 40 89**************99.*********.***********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 61 aa Download sequence |
MSEQEEDLIF RMYKLVGDRW ALIAGRVPGR KAEEIERFWL MRHGEVFASR RRELKAYNLY 60 S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46410.1 | 1e-27 | MYB_related family protein |