PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50831.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 777aa    MW: 85221.2 Da    PI: 6.2455
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.81.2e-2054110157
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                 ++k +++t++q++eLe++F+++++p++++r eL+++l L+++qVk+WFqNrR+++k+
  PON50831.1  54 KKKYHRHTPKQIQELEAFFKECPHPDEKQRLELSMRLALETKQVKFWFQNRRTQMKN 110
                 79999*************************************************995 PP
2START187.19.2e-592825052206
                 HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECT CS
       START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetleviss 87 
                 la++a++el+k+a+ae p+W +s+    e +n +e+ ++f +  +     + +ea r++ vv+  +  lve+l+d + +W e+++    +a+t++ is 
  PON50831.1 282 LALAAMDELMKLAQAEGPLWIRSAgggkETLNHEEYARTFLPCIGtkpsgYVSEATRDTSVVIIHSLALVETLMDAN-RWAEMFPclvsRASTIDMISA 379
                 6899**************************************998999*****************************.********************* PP

                 T......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS
       START  88 g......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179
                 g      galq+m aelq+lsplvp R   f+R+++++ +g+w++vdvS+d +++  +  s+  +++lpSg+l++++++g+skvtwveh +++++ +h+
  PON50831.1 380 GvggtrnGALQVMHAELQVLSPLVPlRPLKFLRFCKKHADGVWAVVDVSIDINREALNADSYFHCRRLPSGCLVQDMPDGYSKVTWVEHSEYDDSGVHQ 478
                 *******************************************************988***************************************** PP

                 HHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 180 llrslvksglaegaktwvatlqrqcek 206
                 ++rs+++s++ +ga++w+atlqrqce+
  PON50831.1 479 IFRSFLRSCMGFGAQRWLATLQRQCEC 505
                 *************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 777 aa     Download sequence    
MDKHGEMGLL GENFDLGMIG RIRDEGYESR SGSDNLEGAS GDDQDAGDDQ PPRKKKYHRH  60
TPKQIQELEA FFKECPHPDE KQRLELSMRL ALETKQVKFW FQNRRTQMKN DVNCFSNGKM  120
ANLNQTQLER HENIILKQEN DKLRAENNMM KDAMSNPMCN QCGGPAIPGQ ISFEEHQLRI  180
ENARLKDELN RICALANKFL GRPLSSLASP ITLPSSTAGL ELAVGRNGIG GLNAVGPPLP  240
MGLDLGDGVS SSAHMIPLVK PSMGMNMMGN EIPFQRSMFI DLALAAMDEL MKLAQAEGPL  300
WIRSAGGGKE TLNHEEYART FLPCIGTKPS GYVSEATRDT SVVIIHSLAL VETLMDANRW  360
AEMFPCLVSR ASTIDMISAG VGGTRNGALQ VMHAELQVLS PLVPLRPLKF LRFCKKHADG  420
VWAVVDVSID INREALNADS YFHCRRLPSG CLVQDMPDGY SKVTWVEHSE YDDSGVHQIF  480
RSFLRSCMGF GAQRWLATLQ RQCECLATLI SPSVANNDQI AISPGGRRSL LKLAKRMVDN  540
FCAGVCASTV RKWDKLRVDN VGEDVRVMTR KSMDDPGEPP GIILSAATTV WIPVSQDRLF  600
EFLRDERMRS EWDILSHGGP MQEMVHITKG QRRGNHVSLL RASSIGSNDS TMLILQETWT  660
DPSGSIVVYA PVDTTAINIV MHGGDSAYVA LLPSGFAILP DGSSQSSYVA ANNEDGPSVK  720
GEANDGSGDG GGCLFTVGFQ ILVNSLPSAK LTVESVETVN NLISCTIDKI KAALNRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein