PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON50535.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

CPP

Protein Properties

Length: 628aa MW: 66907.5 Da PI: 7.707

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON50535.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.9	4.8e-14	124	163	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnC++s+Clk+YCeCfa+g +C+ C+C +C N+ e+ PON50535.1 124 KQKQCNCRHSRCLKLYCECFASGIYCDG-CNCVNCYNNVEN 163 89************************.******9875 PP
2	TCR	50.8	3.3e-16	208	247	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e PON50535.1 208 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 247 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MGEGEEGDLP PKKIQSDAAA AAGGSGAALS DAPTKKLARQ LDFTGFGGAS GSAVLPEHPQ 60 SQPVLPSSRP MTVSQPVVQS QPQPQVVAVP VTPQPSVPPA RMVKPESPKA RSRTNEAKDG 120 TPKKQKQCNC RHSRCLKLYC ECFASGIYCD GCNCVNCYNN VENEAARREA VEATLERNPN 180 AFRPKIASSP HGPRDTREDA GEVMILGKHN KGCHCKKSGC LKKYCECFQA NILCSENCKC 240 MDCKNFEGSE ERQALFHGDH GSNMAYIQQA ANAAITGAIG SSGYASPPVS KKRKGQELFF 300 GPTVTPKDTT VRRIGQYQQA NHIRASAPPS LPSVPAARLG SAAGVGPSKF TYRSLLADII 360 QPQDLKELCS VLVVLSGEAA KTIADQRSAT EKRVEDQSET SLASTTQDRL QSLESELEKA 420 VADDCSSANQ ADKTGPDDSG SDGADLPKGR PMSPDTLALM CDEQDTMFMA AASPGGTGHG 480 CNISSQLPYG QGMTEVYAEQ ERIVLSKFRD CLKTLIALGE IKGKLLQKFM DHSVVDFCFL 540 LLWKTKCSSL ARSEPSLTNG FTNAKIETNF QHGPASNGVS KTILPPTANP KTTQTVSAAV 600 AAASSELPKI PPFPENGGIA NQKAERET

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MGEGEEGDLP PKKIQSDAAA AAGGSGAALS DAPTKKLARQ LDFTGFGGAS GSAVLPEHPQ  60
SQPVLPSSRP MTVSQPVVQS QPQPQVVAVP VTPQPSVPPA RMVKPESPKA RSRTNEAKDG  120
TPKKQKQCNC RHSRCLKLYC ECFASGIYCD GCNCVNCYNN VENEAARREA VEATLERNPN  180
AFRPKIASSP HGPRDTREDA GEVMILGKHN KGCHCKKSGC LKKYCECFQA NILCSENCKC  240
MDCKNFEGSE ERQALFHGDH GSNMAYIQQA ANAAITGAIG SSGYASPPVS KKRKGQELFF  300
GPTVTPKDTT VRRIGQYQQA NHIRASAPPS LPSVPAARLG SAAGVGPSKF TYRSLLADII  360
QPQDLKELCS VLVVLSGEAA KTIADQRSAT EKRVEDQSET SLASTTQDRL QSLESELEKA  420
VADDCSSANQ ADKTGPDDSG SDGADLPKGR PMSPDTLALM CDEQDTMFMA AASPGGTGHG  480
CNISSQLPYG QGMTEVYAEQ ERIVLSKFRD CLKTLIALGE IKGKLLQKFM DHSVVDFCFL  540
LLWKTKCSSL ARSEPSLTNG FTNAKIETNF QHGPASNGVS KTILPPTANP KTTQTVSAAV  600
AAASSELPKI PPFPENGGIA NQKAERET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-176	CPP family protein