PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50438.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 324aa    MW: 35137.4 Da    PI: 10.2078
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50438.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.94.8e-13126170347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r   ++Rt+ q+ s+ qky
       PON50438.1 126 PWTEEEHRTFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKY 170
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MGRKCSHCGH IGHNSRTCTN YRATSSTTTT FVNNANSSLR LFGVQLDIIS SSSANSTSSI  60
SINAMKKSFS MDCLMHSLSS ASSSPSSPLS SRIALDENIS DHKSASIGYL SDGLIGRVQE  120
RKKGVPWTEE EHRTFLIGLE KLGKGDWRGI SRNYVTTRTP TQVASHAQKY FLRQASLNKK  180
KRRSSLFDMV GSGHHNTYSF KPSDDPNTPF SRPKDQNYQN GTTVLPVLLE LSSSQSRQNL  240
MSDHNIHQKP VDCPQLAASH HNHAVPVLLH GLFASKSMAT PSNNAAAAGP DLELKLAAGP  300
RPNSLEQNKS STPGPLLVGP ITVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179183KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-53MYB_related family protein