PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50007.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 270aa    MW: 26897 Da    PI: 9.9321
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.3e-05151172223
                 EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                 +C+ C + F ++  L  H+r+H
  PON50007.1 151 VCSVCRRDFGSWKALFGHMRSH 172
                 6********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MTKKQQPVPP PPQTESETNV VPVALPSTGS STPPVPAADD HQVLGVRQTN VAPLPPLPPP  60
PPRPVVRPNI LPPLPPSRPP QAAGGGGGVG IGRGGRVIPL VGLGGAGGIQ VGGSAEGSGA  120
VHHEVGGERG PGGRPKRKAT EIVAPAGVAP VCSVCRRDFG SWKALFGHMR SHPNREWRGA  180
FPPPVAQKPA AEGDQGPPAG NQAAASAGSQ GSGVAAGRLS IDLNRLQGQE STTASASSSS  240
KVKDGASSTG FDLNKPPTSD DDTDSGDAAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135141PKRKATE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35610.12e-12C2H2 family protein