PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON49460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 196aa MW: 21382.5 Da PI: 9.5065 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.7 | 0.0017 | 58 | 80 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H PON49460.1 58 FECKTCNRQFPSFQALGGHRASH 80 89**********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MKRSITEREL EKLTMANCLM FLSRGGSITT SDHHHHHQFE YSNSSSNLSP SSSPSRVFEC 60 KTCNRQFPSF QALGGHRASH KKPRLMTGEG GNSSDSQSGS PTKPKTHECT ICGLEFAIGQ 120 ALGGHMRRHR AALTENQAPA PVVVPPINIA SLAQVRPVVK KASRVLCLDL NLTPLENDIK 180 FLQLGKSSVP LVDCLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 156 | 165 | RPVVKKASRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 7e-38 | C2H2 family protein |