PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON49100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 267aa MW: 30919 Da PI: 7.0453 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.4 | 3.8e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+ rqvtf+kRr+g+lKK +ELSvLCda++ +iifss+gklyey+s PON49100.1 10 RIENKTTRQVTFAKRRAGLLKKTHELSVLCDAQIGLIIFSSNGKLYEYCS 59 9***********************************************96 PP | |||||||
2 | K-box | 65.6 | 1.8e-22 | 72 | 170 | 2 | 99 |
K-box 2 qkssgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 q ++g++ ++++++e+l+ e++++k+e++nLq ++ ++ GedL+sLsl eL++L++ Le+s +k+R++K +ll +++e+l++ke +l+++n+ L + ++ PON49100.1 72 QLATGTQiVQQSEMEQLCGEVRRIKSETHNLQLSLQRYTGEDLSSLSLGELNELQDMLEHSTQKVRNRKFDLLQQKTENLKRKETMLEKDNEHLFHLIK 170 55677778999*********************************************************************************9987666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MGRGKITIAR IENKTTRQVT FAKRRAGLLK KTHELSVLCD AQIGLIIFSS NGKLYEYCSD 60 TSSMENMIKR YQLATGTQIV QQSEMEQLCG EVRRIKSETH NLQLSLQRYT GEDLSSLSLG 120 ELNELQDMLE HSTQKVRNRK FDLLQQKTEN LKRKETMLEK DNEHLFHLIK EHQAAAASFE 180 HHHHHHQAEQ VTNMNVSKME EDGRIDISHH MNMNMNMNVN VNVLDQFPFA GEEQPNSVLQ 240 LATLQPPSFY PYRLLPTQPN RQDYSLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.2 | 5e-47 | MIKC_MADS family protein |