PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON49054.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 320aa MW: 35432.5 Da PI: 7.6897

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON49054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.5e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + ++++g++R++k+c++rw++yl PON49054.1 14 KGPWSPEEDAKLKEYIEKYGTGgNWIALPQKVGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	43	1e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd +++++++ G++ W+ Ia+ ++ gRt++++k++w++ PON49054.1 69 GEFSDEEDRIIINLFANIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MGRAPCCDKT NVKKGPWSPE EDAKLKEYIE KYGTGGNWIA LPQKVGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDEEDRIII NLFANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMNI 120 INSPQGLRKL PQTASISSLL QHSSSSSLSS SSSSSTSSSS SPSSFCGQVG SFTTPGYETI 180 SAFSSNNIVH VIQESYLGQM PYYQVNKDSL QQLMFGTGDQ ASCSSSDGSC NNEQALLQNN 240 NFFHNGVDQN HHQNVMLSNG DTINVNGKGL WGSEQALLDC FGLEEIKQLI SSNTNTITTS 300 SCSNFLFDEN KTAEERVLYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-77	MYB family protein