PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON49007.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 341aa    MW: 36728.9 Da    PI: 7.6241
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON49007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0014148170123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+ C+++F++   L  H  +H
  PON49007.1 148 YQCKTCNRCFPSFQALGGHRASH 170
                 9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MEAQEELVNN KGDHHGDHDH MVMMRQNMMM MMMMKGKRTK RPRAAPTPLL ISPPTLTNVA  60
SSSSSTARGG GGGGCVLTSP TTSSTELTET VDTTEEEEDM ANCLILLAQG HHGRRARSPE  120
PDFPATAASA GAINKSGGGG GGGGLYVYQC KTCNRCFPSF QALGGHRASH KKPKTTPSNA  180
DQEKKTLSFH VVVDEDEQLV NASTTTTTTS TAISLHISNN NSNNNSSSNK SKVHECAICR  240
AEFTSGQALG GHMRRHRTAS FMNAQTTVTK TTTTTSFTSS TTSASHDQPQ ELKKIKPRNV  300
LELDLNLPAP DDQDRRETKF PFAAEEQVIV FSASSLVDCH Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03510.11e-42C2H2 family protein