PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON48819.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 640aa MW: 70831.8 Da PI: 10.4705

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON48819.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.3	4.7e-10	10	57	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrw 44 ++W t E++ll++av+++G+++W++Ia ++ +t+ +c++++ PON48819.1 10 QPWGTLEELLLACAVNRHGTESWDSIAMELAnrttsAALTPDSCRHKF 57 79*****************************88888778888898887 PP

Sequence ? help Back to Top
Protein Sequence Length: 640 aa Download sequence
MAREHETSVQ PWGTLEELLL ACAVNRHGTE SWDSIAMELA NRTTSAALTP DSCRHKFDDL 60 KRRFMLPNDD ESASFLPMVD ELKKIRVEEL RREVRRRDVS IVSLELKVKR LEEEREHSLR 120 GSRSESAGPD SRKNLGGGGA AGGLTAGKSN SGDSSNRSFN ESNSTSQKRG DSHQNDGVVV 180 VNGEAGPEPE RNELSDPPRT DSEPGKVVDG DDDNNNNNDD DNKNNSNNNN EKDNTKQSSD 240 VQSSMSLSRK KRRRKGGGAA DAAVAGSSSG EEPEAEGDEV SPAATKRVSA IKSEPLVKLL 300 GTIRSHRLGS VFQRRLRSQE SQRYKNLIRQ HLDLQTIQAR LEKGVYSNSF HKFFRDLLLL 360 FNNAIVFFRK SSPEHAAAVE LRALVLEEMH AKLGKTRPFT AKPEPKKEID LASKPSKSSI 420 VVKCGNRSSS KAVSEGVNKK GDTKKESRVV EEKQKASEKK INGSFVAIED KGIRKKRSQE 480 RVGRRGLKTG GKGGESEHEF GGNELSSHDA VEVKADKIEN AKKKQGVANF LQRMKQNSPK 540 EVEDGIDTHV SEDDSEDSKV GKEEKKKRGA KVRSDERKER ITRNSTRGRG TREDSRKAKR 600 GVGRPPKRPE KVAVASGKRG RDNSEPEVGI GGRLKKRSRR

Sequence ? help Back to Top

Protein Sequence Length: 640 aa Download sequence

MAREHETSVQ PWGTLEELLL ACAVNRHGTE SWDSIAMELA NRTTSAALTP DSCRHKFDDL  60
KRRFMLPNDD ESASFLPMVD ELKKIRVEEL RREVRRRDVS IVSLELKVKR LEEEREHSLR  120
GSRSESAGPD SRKNLGGGGA AGGLTAGKSN SGDSSNRSFN ESNSTSQKRG DSHQNDGVVV  180
VNGEAGPEPE RNELSDPPRT DSEPGKVVDG DDDNNNNNDD DNKNNSNNNN EKDNTKQSSD  240
VQSSMSLSRK KRRRKGGGAA DAAVAGSSSG EEPEAEGDEV SPAATKRVSA IKSEPLVKLL  300
GTIRSHRLGS VFQRRLRSQE SQRYKNLIRQ HLDLQTIQAR LEKGVYSNSF HKFFRDLLLL  360
FNNAIVFFRK SSPEHAAAVE LRALVLEEMH AKLGKTRPFT AKPEPKKEID LASKPSKSSI  420
VVKCGNRSSS KAVSEGVNKK GDTKKESRVV EEKQKASEKK INGSFVAIED KGIRKKRSQE  480
RVGRRGLKTG GKGGESEHEF GGNELSSHDA VEVKADKIEN AKKKQGVANF LQRMKQNSPK  540
EVEDGIDTHV SEDDSEDSKV GKEEKKKRGA KVRSDERKER ITRNSTRGRG TREDSRKAKR  600
GVGRPPKRPE KVAVASGKRG RDNSEPEVGI GGRLKKRSRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	249	255	RKKRRRK
2	250	255	KKRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	3e-33	MYB_related family protein