PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON48710.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 361aa    MW: 40189.1 Da    PI: 6.7163
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON48710.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.7e-13184230455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h ++Er+RR+++ ++f  L +++P +     kK++Ka++L  A++YIk+Lq
  PON48710.1 184 DHVIAERKRREKLSQRFIALSTVVPDL-----KKMDKASVLGDAIKYIKNLQ 230
                 6999***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MEVPSAKWIS ELEMEDPTNL FHQYQVDYSL DDLNFQSFSS ESYSSYNPNF VPENAQNLSS  60
NNTALEPPQT EFERPAKQLK TNSWNSCTTN NNNQMSAKGS LSASSSQLIS FEKYASSAAA  120
TPDNKHYNNL EGSVIMKPKD EPGMNGCNMV FQSSCEGQIC SPNYGQGVKR AVGSMSRSPL  180
HAQDHVIAER KRREKLSQRF IALSTVVPDL KKMDKASVLG DAIKYIKNLQ ERLITLEEQA  240
AKKTVESVVF VKRSQLSGDG ETSSSDENFD SNSGQPLPEI EARVSGKDVL IRIHCEKHKG  300
CIANILNEIE KLHLTIVDSS VLQFGGSTNH IAIVAQMDVE YSMKVKDLVR NLRQALLKNR  360
K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189194ERKRRE
2190195RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-59bHLH family protein