PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON48155.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 567aa MW: 61170.3 Da PI: 8.9382

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON48155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.5e-05	91	113	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H PON48155.1 91 FICEICNKGFQRDQNLQLHRRGH 113 89*******************88 PP
2	zf-C2H2	12.6	0.00043	167	189	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ PON48155.1 167 WKCDKCSKRYAVQSDWKAHSKTC 189 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MMLFQQQQQQ SRVVDENMYN LTSASGEASV SSSGNRAETG TNNNFPQQYF ASPVPQSQPA 60 AKKKRNLPGN PDPDAEVIAL SPKTLLATNR FICEICNKGF QRDQNLQLHR RGHNLPWKLK 120 QRTSKEVKKK VYVCPEASCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCD KCSKRYAVQS 180 DWKAHSKTCG TREYRCDCGT LFSRRDSFIT HRAFCDALAE ESARSAINGG VGVGVGVEPD 240 PLGSSSSSTI LSHLNLQTQL MNTNSQHFHS FSLKKEQQSF TPTSGLIRPD LPPWLSGPTQ 300 SHDLSSSSSI FSTTLDQDFS QQESITLLHG ATPNPNPNPN PNLGGGALPP YQPPPSAHMS 360 ATALLQKAAQ MGATMSSAAA SSPAIMMRPH QAHHQSAAAD SGATAATITS STAIGKFGLN 420 LSSSRGHHQN QQDQTAPIAQ GFGYGHKAST GTSNTSTPPP LLHHDMMCNT DTIEDPFKGV 480 ILSCKKDGNS LNLDAFTRTT AIAAAAAAVQ LNKTDDSGGG NINGEGLTRD FLGLRPLSHS 540 EILNLAGLGN TINISRDHQS NQPHKPW

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MMLFQQQQQQ SRVVDENMYN LTSASGEASV SSSGNRAETG TNNNFPQQYF ASPVPQSQPA  60
AKKKRNLPGN PDPDAEVIAL SPKTLLATNR FICEICNKGF QRDQNLQLHR RGHNLPWKLK  120
QRTSKEVKKK VYVCPEASCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCD KCSKRYAVQS  180
DWKAHSKTCG TREYRCDCGT LFSRRDSFIT HRAFCDALAE ESARSAINGG VGVGVGVEPD  240
PLGSSSSSTI LSHLNLQTQL MNTNSQHFHS FSLKKEQQSF TPTSGLIRPD LPPWLSGPTQ  300
SHDLSSSSSI FSTTLDQDFS QQESITLLHG ATPNPNPNPN PNLGGGALPP YQPPPSAHMS  360
ATALLQKAAQ MGATMSSAAA SSPAIMMRPH QAHHQSAAAD SGATAATITS STAIGKFGLN  420
LSSSRGHHQN QQDQTAPIAQ GFGYGHKAST GTSNTSTPPP LLHHDMMCNT DTIEDPFKGV  480
ILSCKKDGNS LNLDAFTRTT AIAAAAAAVQ LNKTDDSGGG NINGEGLTRD FLGLRPLSHS  540
EILNLAGLGN TINISRDHQS NQPHKPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-114	C2H2 family protein