PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON47661.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 355aa MW: 39400.5 Da PI: 5.4504

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON47661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.6	2.8e-07	151	171	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H PON47661.1 151 CEICGKGFKRDANLRMHMRAH 171 *******************99 PP
2	zf-C2H2	14.8	8.5e-05	240	263	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k+Fs +Lk+H+r++ PON47661.1 240 YSCNRCNkKRFSVLADLKSHLRNC 263 99********************98 PP
3	zf-C2H2	11.5	0.00092	271	287	5	21
TTTEEESSHHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHir 21 Cg++Fsrk+ L H+ PON47661.1 271 TCGTTFSRKDKLFGHMA 287 6**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MTSYLGESSH PRAECSGDLT REDPFGGSDP RVHLANLFSA QMRMDIVQRF LSELVNASAP 60 LSVDQMAMVS SEIFSTIQQV IEDGTAILAL SQPPMIAAPD PPDPKPVADV KAESFDEESI 120 KIGGGEDEGV GDFEIVELDS VELLAEHVHL CEICGKGFKR DANLRMHMRA HGNQYKTPEA 180 LSKPERRNGA SAEPNRTGPV RFSCPHAGCN RNKEHKKFRP LKSAICAKNH FRRSHCPKMY 240 SCNRCNKKRF SVLADLKSHL RNCGEVRWRC TCGTTFSRKD KLFGHMALFE GHMPAVVEDD 300 EKGKPLGAID EDEDLDMDEL CFREDDELFE GLLDGFGRPV EGFSLQDVLG SPTGF

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MTSYLGESSH PRAECSGDLT REDPFGGSDP RVHLANLFSA QMRMDIVQRF LSELVNASAP  60
LSVDQMAMVS SEIFSTIQQV IEDGTAILAL SQPPMIAAPD PPDPKPVADV KAESFDEESI  120
KIGGGEDEGV GDFEIVELDS VELLAEHVHL CEICGKGFKR DANLRMHMRA HGNQYKTPEA  180
LSKPERRNGA SAEPNRTGPV RFSCPHAGCN RNKEHKKFRP LKSAICAKNH FRRSHCPKMY  240
SCNRCNKKRF SVLADLKSHL RNCGEVRWRC TCGTTFSRKD KLFGHMALFE GHMPAVVEDD  300
EKGKPLGAID EDEDLDMDEL CFREDDELFE GLLDGFGRPV EGFSLQDVLG SPTGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.3	8e-72	C2H2 family protein