PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON47384.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 126aa MW: 14515.9 Da PI: 10.4209 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11 | 0.0014 | 95 | 111 | 5 | 21 |
TTTEEESSHHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHir 21 +Cg F++k +Lk Hi+ PON47384.1 95 ICGSDFKHKRSLKDHIK 111 8**************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MWGHGSEYRR GPESLKGSQP RVMLGIPCYC CAEGCKNNKE HPRAKPLKDF RTLQTHYKRK 60 HGIKPFMCRK CGKLLAVKGD WRTHEKNCGK RWLCICGSDF KHKRSLKDHI KAFGSDHSPF 120 PPTSSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34790.1 | 2e-77 | C2H2 family protein |