PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47300.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 734aa    MW: 79219.6 Da    PI: 5.9302
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47300.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS332.96.1e-1023807331374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l+++L ++Ae +++g+  laq +Larl++++sp g+p+qR+a+yf+eAL+  l++       +l+  + +    + ++ a+k+fse+sP+l+f+++t+N
  PON47300.1 380 LIDQLSKAAELIETGNPVLAQGILARLNHHVSPLGKPFQRAAFYFKEALELLLHN-------SLALPPFN---LIFKIGAYKTFSEISPVLQFANFTCN 468
                 5789**************************************************9.......56666665...89************************ PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle..leeLrv 196
                 qaIlea+eg +r+H+iDfdi++G+QW++++q+La R++g+ sl+iT+++sp+++++ el  t+e+L++fA+el++ fe +++ + +l +    +  L++
  PON47300.1 469 QAILEAMEGFSRIHVIDFDIGYGGQWASFMQELALRNGGAGSLKITAFASPSTHDEFELGFTQENLKHFAAELNLAFELEIV-SVELLNSGswPLPLHI 566
                 *********************************************************************************6.4444444401456799 PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 ++gEa+aV+l +  ++ +  ++sl+     vL++vk+lsPkvvv  e+ +d+++ +F  ++++a++ ys l++sl+a    + +  +k+E++ll++ i+
  PON47300.1 567 SEGEAIAVHLPIGSFSSY--PLSLPL----VLRFVKQLSPKVVVSLERGCDRTDVPFPLQIIHAFHSYSGLLESLDAV-NVNLDVLQKIEKFLLQPGIE 658
                 9***********999888..777777....*********************************************665.3466999************* PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 + v  ++++      +   Wr+ + ++GF+p+++s+++++qa++l+++++++g++ve+++ sl l+W++++L+s+SaWr
  PON47300.1 659 KTVLSRHRS----PDRTPPWRSSFLNSGFSPLTFSNFTESQAECLVQRTPVRGFHVEKKQSSLALCWQRKELISASAWR 733
                 ****99998....89999************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 734 aa     Download sequence    
MKAMPLPFEE FQGKGVLDFF SFSSTASDSL LSPQQQRPRK WNTLISKENC YVGSEPTSVL  60
DTRRSPSPPR STSTLSSSLG SCGCGGGGGG GGNGGGTGST DTTTITGVAA AAASETPSGA  120
GAALEEETCG LGMEDWESVL SESPGQEQSI MRLIMADVDD PSLGLNKLLQ TGSVSQEMEF  180
NAGGFGSVDQ GFGFQPNGGN LVGSFIDPSG KGTTCSDSPF NSATPNAHNN NTRHGSAFNP  240
INPMFSASAN SLLPVSLSPL AVESMDAKPQ VFNLQVVLNQ NQANLAQNPA LVMPLTYAQL  300
QEHHVISQLP AKRLNTSAVG PNYQVQKVQF PSSGQEVFIR GQEQQLQLLH QRPTMAGSKQ  360
KMMSPGAGDE LANHQLQQAL IDQLSKAAEL IETGNPVLAQ GILARLNHHV SPLGKPFQRA  420
AFYFKEALEL LLHNSLALPP FNLIFKIGAY KTFSEISPVL QFANFTCNQA ILEAMEGFSR  480
IHVIDFDIGY GGQWASFMQE LALRNGGAGS LKITAFASPS THDEFELGFT QENLKHFAAE  540
LNLAFELEIV SVELLNSGSW PLPLHISEGE AIAVHLPIGS FSSYPLSLPL VLRFVKQLSP  600
KVVVSLERGC DRTDVPFPLQ IIHAFHSYSG LLESLDAVNV NLDVLQKIEK FLLQPGIEKT  660
VLSRHRSPDR TPPWRSSFLN SGFSPLTFSN FTESQAECLV QRTPVRGFHV EKKQSSLALC  720
WQRKELISAS AWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-148GRAS family protein