PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47193.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 482aa    MW: 52836.2 Da    PI: 5.7583
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.5e-05153173323
                 ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                 Cp+C k+F++   L  H+r+H
  PON47193.1 153 CPICFKTFPSIKALFGHMRSH 173
                 ********************9 PP

2zf-C2H214.50.0001444466123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+ C++sF++   L  H++ H
  PON47193.1 444 YVCSVCKRSFPSYQALGGHMSIH 466
                 9*******************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    
MDQELGSCDH QEISMEASTV KTSGAASNGR LCLKLKIPKP EPNKDNYEVK EEEEEEEKEK  60
EDEDEEDQEL VALLPSKCQV CHKRFKSGKA LGGHKRMHNQ QAAAATTTTS TTGLTNKINS  120
ISISSRTNAN FKATKESSAP SGSTASSSCT NICPICFKTF PSIKALFGHM RSHPERTWRG  180
IEPPKPTTTT TTTTTSLPPL IPTKPTCSSI SSTTDHPHHH QHDLDDDQNN NNVIHSTAAA  240
AADDPLVTKT WAVTAKRGRK SLASSTTSTA AASAITASAS RDDDDDDDDD DEEDDDDDSG  300
GCSGLEERMN EAVLDLMMLA RASPANTNYN NRPPAPPKDH KKNIIKKRKF AKEEDEMVDE  360
DEDDEDYNSD SSNSSSQNSI LNWKLRMRKS RRKMKLVDDI DQLDLDLDPA PPQAEEKKKP  420
KPKPKQPNAL VTKAISSSCS TSKYVCSVCK RSFPSYQALG GHMSIHNKIA XLQLQGGFSI  480
LI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1388421RKSRRKMKLVDDIDQLDLDLDPAPPQAEEKKKPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56200.14e-12C2H2 family protein