PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47092.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 285aa    MW: 31620.6 Da    PI: 8.5662
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47092.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.42.4e-11556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+ E+e l+ +v+++G+g Wk I +         +R+  ++k++w+++
       PON47092.1  5 KQKWTPKEEEALLAGVAKYGTGKWKNIIKDPDfahtlCNRSNIDLKDKWRNL 56
                     79*************************877777777779***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MGNQKQKWTP KEEEALLAGV AKYGTGKWKN IIKDPDFAHT LCNRSNIDLK DKWRNLSVSS  60
GSSKEKSRGH KTKSIVASEN LIIQNSDIAA SIPLNASSCA SMNDPSNCTQ DGKSASSYKE  120
MIFEALSTMK DVNESDVGAI HNFSEKRHGT PLSPNFKRSL RSRSGKLVVQ EKPEKVESGY  180
KIRKAIPMGT NTPSPKQKNI RPQRSLDSRL STYTESQDDV ADAAFKVAEA ENKSFLAAEA  240
VREAEQLSRI AEDSECMLQL MNEIYKQCSR GELVHLAYVV NCELD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.23e-55MYB_related family protein