PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON47059.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 1025aa MW: 112918 Da PI: 7.649

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON47059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.9	4.7e-08	521	569	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lvd+v + G g+W+ I r Rt ++k++w+++l PON47059.1 521 AWTLVEVMKLVDGVSKCGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 569 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1025 aa Download sequence
METEVGVEKN DEGKCEESGC EKSSPSSSSP KYIADPVVYK LVRVEGDGRF VPATDDEVME 60 VDDFLVDDRT EMHGVADGGT TAECMSKDEG SAIVKLQLES SEGLSRSGNA EADAEKLTSD 120 LETASFYKRD KLLTIDEKHQ SEICMQEIVP SSAPIVGGNC KSLSGSVGKF SKLSDGQPET 180 GSSTSAVCNN GKPDFSKLKG EICLDNMSIR ELHELFKATF GRETTVKDKM WLKRRIAMGL 240 TNSCDVTATT FTIKDNKLVD KVKEESCKNE NDTFAEGSAA EAMNVSSKNS PTNCDSQMED 300 HEIVSGKRFS DSVGFDFGIE DLNAEQRAAK RVRKPTRRYI EELSEAESRD CSPKVHSSAK 360 NIGLGWTSPK SCPRPVKNVS FNERIVLTRL DSLGGSGVQI PCVSRVRRSR PRKNIKALMR 420 FHPSSVGMEA EVVKKALAVP SSQPDSELTD KVSEFRSPSE QSEPLLTSEA ENDKQCAAMG 480 TVQLGKNLDP KPTESYEDTS DDNIATVTTA KGGMRRKHHR AWTLVEVMKL VDGVSKCGAG 540 RWSEIKRLAF ASYSYRTSVD LKDKWRNLLK ASITQTPPDE GMNSRKHAAV PIPAPILLRV 600 RQLAEMHSQV PPNLGSNSLA GVGGRMDRNQ AGLRSPLHDF QLQGSHHRFG TATQPSLEYH 660 LGQLKAKIAK LRTQLLEPPK GSSGGGEGFE VTKFGHGRVA LIGFPSVGKS TLLTMLTGTQ 720 SEAASYEFTT LTCIPGIIHY NDTKIQLLDL PGIIEGASEG KGRGRQVIAV AKSSDIVLMV 780 LDASKSEGHR QILTKELEAV GLRLNKRPPQ IYFKKKKTGG ISFNSTLPLT HVDEKLCYQI 840 LHEYKIHNAE VLFREDATVD DLIDVIEGNR KYMKCVYVYN KIDVIGIDDV DKLARQPSSL 900 NLDRLLAKMW EEMGLVRVYT KPQGQQPDFS DPVVLSNDRG GCTVEDFCNH IHRSLVKDVK 960 YVLVWGISAR HYPQHCGLGH NLHDEDVVQI VKKKEKEEGG RGRFKSHSTA PARISDREKK 1020 APLKT

Sequence ? help Back to Top

Protein Sequence Length: 1025 aa Download sequence

METEVGVEKN DEGKCEESGC EKSSPSSSSP KYIADPVVYK LVRVEGDGRF VPATDDEVME  60
VDDFLVDDRT EMHGVADGGT TAECMSKDEG SAIVKLQLES SEGLSRSGNA EADAEKLTSD  120
LETASFYKRD KLLTIDEKHQ SEICMQEIVP SSAPIVGGNC KSLSGSVGKF SKLSDGQPET  180
GSSTSAVCNN GKPDFSKLKG EICLDNMSIR ELHELFKATF GRETTVKDKM WLKRRIAMGL  240
TNSCDVTATT FTIKDNKLVD KVKEESCKNE NDTFAEGSAA EAMNVSSKNS PTNCDSQMED  300
HEIVSGKRFS DSVGFDFGIE DLNAEQRAAK RVRKPTRRYI EELSEAESRD CSPKVHSSAK  360
NIGLGWTSPK SCPRPVKNVS FNERIVLTRL DSLGGSGVQI PCVSRVRRSR PRKNIKALMR  420
FHPSSVGMEA EVVKKALAVP SSQPDSELTD KVSEFRSPSE QSEPLLTSEA ENDKQCAAMG  480
TVQLGKNLDP KPTESYEDTS DDNIATVTTA KGGMRRKHHR AWTLVEVMKL VDGVSKCGAG  540
RWSEIKRLAF ASYSYRTSVD LKDKWRNLLK ASITQTPPDE GMNSRKHAAV PIPAPILLRV  600
RQLAEMHSQV PPNLGSNSLA GVGGRMDRNQ AGLRSPLHDF QLQGSHHRFG TATQPSLEYH  660
LGQLKAKIAK LRTQLLEPPK GSSGGGEGFE VTKFGHGRVA LIGFPSVGKS TLLTMLTGTQ  720
SEAASYEFTT LTCIPGIIHY NDTKIQLLDL PGIIEGASEG KGRGRQVIAV AKSSDIVLMV  780
LDASKSEGHR QILTKELEAV GLRLNKRPPQ IYFKKKKTGG ISFNSTLPLT HVDEKLCYQI  840
LHEYKIHNAE VLFREDATVD DLIDVIEGNR KYMKCVYVYN KIDVIGIDDV DKLARQPSSL  900
NLDRLLAKMW EEMGLVRVYT KPQGQQPDFS DPVVLSNDRG GCTVEDFCNH IHRSLVKDVK  960
YVLVWGISAR HYPQHCGLGH NLHDEDVVQI VKKKEKEEGG RGRFKSHSTA PARISDREKK  1020
APLKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	407	413	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-109	MYB_related family protein