PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON46809.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HSF

Protein Properties

Length: 485aa MW: 53308.3 Da PI: 4.6878

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON46809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.5	1.4e-35	177	268	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++++++++++++++sws+ +sf+v+d++ef+k++LpkyFkhsnf+SF+RQLn+YgFkkv+ ++ weF+++ F+ gkk+ll++ik PON46809.1 177 FLNKTFQMVDEPDTDSVVSWSQARDSFIVWDSHEFSKNLLPKYFKHSNFSSFIRQLNTYGFKKVDPDR---------WEFANEGFQGGKKHLLKNIK 264 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ PON46809.1 265 RRSK 268 87 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MVAVADGCSS GGGGGACYSP LSSTQLPRIW EEHNDVVGAQ NERTHEPVLV LASVKEEEEE 60 EEEEEEDGQI ALSYGFGAGE GGGSSSSSSP SADPPQLGPP PPPAPVPINA LVKDETKPVT 120 PVKIKEENIE LIDDDDDHDH HTMNERGYPF NGGCSSSSSL VLPAPMEGLH EAGPPPFLNK 180 TFQMVDEPDT DSVVSWSQAR DSFIVWDSHE FSKNLLPKYF KHSNFSSFIR QLNTYGFKKV 240 DPDRWEFANE GFQGGKKHLL KNIKRRSKYN NKHPNGATAS RSGSDPGKSS GLESEIESLK 300 KDHSSLRAEI LSLRREQKDS QNQITAVEER IRCAECRQHQ MLLFLSKTAI NPSIVQLLMQ 360 KRMQRKREVI GGGEMGKRRR LLPTGGGEEE VTIQSILTGG LPKAECAAVA PFETAMNEDI 420 GGGGESDMLS VYNVVSDNLL DDVSFLEEEL SINDNKFYHE LKDLIEKPRD WGGYSNMTSC 480 IGSML

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MVAVADGCSS GGGGGACYSP LSSTQLPRIW EEHNDVVGAQ NERTHEPVLV LASVKEEEEE  60
EEEEEEDGQI ALSYGFGAGE GGGSSSSSSP SADPPQLGPP PPPAPVPINA LVKDETKPVT  120
PVKIKEENIE LIDDDDDHDH HTMNERGYPF NGGCSSSSSL VLPAPMEGLH EAGPPPFLNK  180
TFQMVDEPDT DSVVSWSQAR DSFIVWDSHE FSKNLLPKYF KHSNFSSFIR QLNTYGFKKV  240
DPDRWEFANE GFQGGKKHLL KNIKRRSKYN NKHPNGATAS RSGSDPGKSS GLESEIESLK  300
KDHSSLRAEI LSLRREQKDS QNQITAVEER IRCAECRQHQ MLLFLSKTAI NPSIVQLLMQ  360
KRMQRKREVI GGGEMGKRRR LLPTGGGEEE VTIQSILTGG LPKAECAAVA PFETAMNEDI  420
GGGGESDMLS VYNVVSDNLL DDVSFLEEEL SINDNKFYHE LKDLIEKPRD WGGYSNMTSC  480
IGSML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	260	266	LKNIKRR
2	365	380	RKREVIGGGEMGKRRR
3	377	381	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	4e-84	HSF family protein