PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON46563.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 263aa MW: 28888.6 Da PI: 7.8034 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.1 | 0.00029 | 89 | 111 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F ++ L H++ H PON46563.1 89 FECQYCFKEFANSQALGGHQNAH 111 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 263 aa Download sequence |
MAKGASNQFS SACDGENGHG YSAGSSIEKK LKLFGFELNP CKNDGDITSL KGSAEGDESV 60 NSSNSVSYGK DKLSKEKSSS STEPDDKKFE CQYCFKEFAN SQALGGHQNA HKKERMKKKR 120 LQLQARKASI NYYLQPFQNN PAFSYHNSRT TPLFYDANSY ASDFTIYDES HQISFNPFDS 180 DSSHIQQGSH VSKWYSLPSC NSTVPFQQDT SCTFTFTHAA ERSGSGNGSV IFKPSPLSGP 240 KQSCKSLDLQ LGLGFESNIQ SST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10480.1 | 7e-18 | C2H2 family protein |