PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON46537.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 316aa    MW: 34302.5 Da    PI: 8.2436
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON46537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.1e-14100144347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       PON46537.1 100 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 144
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MSRTCSQCGN NGHNSRTCTE VCGGGDGGNS GGATTGENAI MLFGVRVTAE GNAFRKSASM  60
NNLSQYEQPP HQDSNAEAGY ASDDVVHASG RSRERKRGTP WTEEEHKLFL LGLQKVGKGD  120
WRGISRNFVK TRTPTQVASH AQKYFLRRSN HNRRRRRSSL FDITTDTFMN SSNMDEDLTV  180
LQEAPSSLPV LPHPPVQPCN LGIFPVSNFP MTLAPLVLPV SPENSAESIA LESGNQAKTP  240
PLITKPIRPI PLHPVLLPPS SKMADLNLNN SFVEPLPLSL KLSTPSSEEQ QSPPPQQQHP  300
SAFQAMSNGD SIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.21e-76MYB_related family protein