PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON46441.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 246aa MW: 28309.1 Da PI: 9.2832 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95 | 3.2e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+SvLCda+va+i+fs++gkl eys+ PON46441.1 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDADVALIVFSTKGKLAEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 103.7 | 2.3e-34 | 86 | 174 | 12 | 100 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + + s++ e+akLk++++ Lqr+q+h++Ge+L+sL+lkeLq+LeqqL+++lk++R++Kn++++e+i+elqkk k+lqe+n+ L+kk++e PON46441.1 86 EPTGSWSLEHAKLKARVDVLQRNQKHFMGEELDSLTLKELQSLEQQLDSALKHVRTRKNQVMYESISELQKKDKALQEQNNLLSKKIKE 174 55789*********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRSGLLK KAHEISVLCD ADVALIVFST KGKLAEYSTN 60 SSMLRILERY ERYSYAERQL LSDDLEPTGS WSLEHAKLKA RVDVLQRNQK HFMGEELDSL 120 TLKELQSLEQ QLDSALKHVR TRKNQVMYES ISELQKKDKA LQEQNNLLSK KIKEKEKDLA 180 RQALLNQQQS NDADSSSVLQ PQPMQVVDIG VPPRGENGEE KEVEEAQHQN RGNSQLLPWM 240 LNNLNT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 2e-94 | MIKC_MADS family protein |