PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON45651.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 1519aa MW: 169814 Da PI: 8.8184

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON45651.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	1429	1451	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H PON45651.1 1429 CPvkGCGKKFFSHKYLVQHRRVH 1451 9999*****************99 PP
2	zf-C2H2	12.2	0.00056	1487	1513	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg++F+ s++ rH r+ H PON45651.1 1487 YVCTepGCGQTFRFVSDFSRHKRKtgH 1513 89********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1519 aa Download sequence
MAASALPSDP SPEVFSWLKT LPLAPEYHPT LAEFQDPISY IFKIEKEASK YGICKIVPPV 60 PPSPKKTVIA NLNKSLAARA GSPDGSGPKT PPTFTTRQQQ IGFCPRKPRP VQRPVWQSGE 120 HYTFQEFEAK AKGFEKGFFK KCAKKGGNGG GPSALEIETL YWKATVDKPF SVEYANDMPG 180 SAFAPVRAKK VREAGESVTL GETSWNMRAV SRSKGSLLRF MKEEIPGVTS PMVYVAMMFS 240 WFAWHVEDHD LHSLNYMHMG AGKTWYGVPR EAAVAFEEVV RVHGYGGEIN PLVTFSVLGE 300 KTTVMSPEVF ITAGVPCCRL VQNAGEFVVT FPRAYHTGFS HGFNCGEAAN IATPEWLRVA 360 KDAAIRRASI NYPPMVSHFQ LLYDLALALC SRIPVSISAE PRSSRLKDKK KGEGETVVKE 420 LFVQNVLQNN DLLHVLGKGS PIVLLPRSSS DISLCSKLRV GSQLRLNASF PLGSCNSREE 480 MKSSGSLISD DLMIDRKQDI DQVRDFYPVK GKLASLCEGS WVPSLRGNKS TSTLNSKTPN 540 MNIDGKSNVD GDRLSDQRLF SCVTCGILSF DCVAIVQPRD PATRYLMSAD CSFFNDWVVN 600 AGVANNVFPV SSGDQTASMQ NTYTGWTDNN APLGSCEVPV QSVTYQVQTE DPNNEVVSNS 660 ETHDATSALG LLALNYGNSS DSEEDPVQED VIVDGHEINT TNCSLESKSR CESSSLSLQN 720 CQSDAAGVHG CSPRELDSRE ESASQNADAY MENGQNRDNA KYNSHQNLDC SVDFGTNNIP 780 STESNLVGKI RDSIKVSQTC SPCTYDAEAT KFCKAIAPMK NENVPFAPIC DEDSSRMHVF 840 CLEHAVEVEQ QLRQIGGVHI LLLCHPDYPK IEAEAKSMAE ELGINDLWNN TTFRDATKDD 900 QERIQSALDS EEAMPKNGDW AVKLGINLFY SANLSRSPLY SKQMPYNSVI YNAFGRSSPA 960 SSPTRSDGFG RRPIKKKVVA GKWCGRVWMS SQVHPFLAKR NPEEEEEVRG FLGWGIPDEK 1020 LDRKYDSTNR NSNAIITKKY VRKRKMKVEN ESTKKAKCIK REDAVSENSM DDDSLEHRRS 1080 LRSKQAIRIE AGSTKKGKHI QMEDAISDDS MEDNSHRQRK RTLKSKQATF IETDDMVSDD 1140 SLGVDSHHRN KKIPRSGQAK HTGREDAFSD DSLDSDSHQL RRRVTKSKQA RHTGIQDVVF 1200 GDSLESESNP PHRRIPRSKQ AKFMEGEDSA SDDFTGTNLY KQKTRIYKSK LAKSIEREDE 1260 VSDEPVEANA HQEDKRILRS KQRNSAMQQK RKLETSRMRP ATSRPVKQST RQLVKQETPK 1320 LKQQTTRLRN NQCEQNTLHV CAEEEVEGGP STRLRKRAPK TQKTAEPKRK EQQPTSRKKV 1380 KNALAVKAQA GRSDAKLKDE EAEYMCDVEG CTMSFGVKHE LVLHKRNICP VKGCGKKFFS 1440 HKYLVQHRRV HMDDRPLRCP WKGCKMTFKW AWARTEHIRV HTGARPYVCT EPGCGQTFRF 1500 VSDFSRHKRK TGHSAKKGR

Sequence ? help Back to Top

Protein Sequence Length: 1519 aa Download sequence

MAASALPSDP SPEVFSWLKT LPLAPEYHPT LAEFQDPISY IFKIEKEASK YGICKIVPPV  60
PPSPKKTVIA NLNKSLAARA GSPDGSGPKT PPTFTTRQQQ IGFCPRKPRP VQRPVWQSGE  120
HYTFQEFEAK AKGFEKGFFK KCAKKGGNGG GPSALEIETL YWKATVDKPF SVEYANDMPG  180
SAFAPVRAKK VREAGESVTL GETSWNMRAV SRSKGSLLRF MKEEIPGVTS PMVYVAMMFS  240
WFAWHVEDHD LHSLNYMHMG AGKTWYGVPR EAAVAFEEVV RVHGYGGEIN PLVTFSVLGE  300
KTTVMSPEVF ITAGVPCCRL VQNAGEFVVT FPRAYHTGFS HGFNCGEAAN IATPEWLRVA  360
KDAAIRRASI NYPPMVSHFQ LLYDLALALC SRIPVSISAE PRSSRLKDKK KGEGETVVKE  420
LFVQNVLQNN DLLHVLGKGS PIVLLPRSSS DISLCSKLRV GSQLRLNASF PLGSCNSREE  480
MKSSGSLISD DLMIDRKQDI DQVRDFYPVK GKLASLCEGS WVPSLRGNKS TSTLNSKTPN  540
MNIDGKSNVD GDRLSDQRLF SCVTCGILSF DCVAIVQPRD PATRYLMSAD CSFFNDWVVN  600
AGVANNVFPV SSGDQTASMQ NTYTGWTDNN APLGSCEVPV QSVTYQVQTE DPNNEVVSNS  660
ETHDATSALG LLALNYGNSS DSEEDPVQED VIVDGHEINT TNCSLESKSR CESSSLSLQN  720
CQSDAAGVHG CSPRELDSRE ESASQNADAY MENGQNRDNA KYNSHQNLDC SVDFGTNNIP  780
STESNLVGKI RDSIKVSQTC SPCTYDAEAT KFCKAIAPMK NENVPFAPIC DEDSSRMHVF  840
CLEHAVEVEQ QLRQIGGVHI LLLCHPDYPK IEAEAKSMAE ELGINDLWNN TTFRDATKDD  900
QERIQSALDS EEAMPKNGDW AVKLGINLFY SANLSRSPLY SKQMPYNSVI YNAFGRSSPA  960
SSPTRSDGFG RRPIKKKVVA GKWCGRVWMS SQVHPFLAKR NPEEEEEVRG FLGWGIPDEK  1020
LDRKYDSTNR NSNAIITKKY VRKRKMKVEN ESTKKAKCIK REDAVSENSM DDDSLEHRRS  1080
LRSKQAIRIE AGSTKKGKHI QMEDAISDDS MEDNSHRQRK RTLKSKQATF IETDDMVSDD  1140
SLGVDSHHRN KKIPRSGQAK HTGREDAFSD DSLDSDSHQL RRRVTKSKQA RHTGIQDVVF  1200
GDSLESESNP PHRRIPRSKQ AKFMEGEDSA SDDFTGTNLY KQKTRIYKSK LAKSIEREDE  1260
VSDEPVEANA HQEDKRILRS KQRNSAMQQK RKLETSRMRP ATSRPVKQST RQLVKQETPK  1320
LKQQTTRLRN NQCEQNTLHV CAEEEVEGGP STRLRKRAPK TQKTAEPKRK EQQPTSRKKV  1380
KNALAVKAQA GRSDAKLKDE EAEYMCDVEG CTMSFGVKHE LVLHKRNICP VKGCGKKFFS  1440
HKYLVQHRRV HMDDRPLRCP WKGCKMTFKW AWARTEHIRV HTGARPYVCT EPGCGQTFRF  1500
VSDFSRHKRK TGHSAKKGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1039	1045	KYVRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein