PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON44453.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | G2-like | ||||||||
Protein Properties | Length: 472aa MW: 51199.1 Da PI: 6.3077 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.8 | 1.1e-27 | 188 | 242 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++ PON44453.1 188 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 242 5689*****************.********************************86 PP | |||||||
2 | Myb_DNA-binding | 39.4 | 1.4e-12 | 191 | 240 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ PON44453.1 191 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 240 57********************************889************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence |
MLAVSPLRDT YTTRDEKQGE ALDSSTNSCT ISFSSSINGG DAFPDFADSN LLDSIDFDDL 60 FIGINVDGDV LPDLEMDPEI LADFSPEDYN SDVNTSVSVD KSADVDDNVG NGTNAVDQDK 120 TKPAEVEYDH DNVSGSGSGL DSSPSESVAR NNGASSTNTN TKEAADKGGG RKSTSTAQSK 180 NNFQGKRKVK VDWTPELHRR FVQAVEQLGV DKAVPSRILE LMGIDCLTRH NIASHLQKYR 240 SHRKHLLARD AEAASWSQRR QMYGSAGGGA TGKRDVSPWP VAPTMGFPPM TPPPVQPIPP 300 PMHHHFRPLH VWGHPTVDQS LMHVWPPKHL PHSHSHPPPQ VWPPVTHPPP PDPSYWRSHH 360 QRVPNALTPG TPCFPQTLAT APRFATPPVP GIPPPHAMYK VDPGNGSLTN GQSGPLPFFD 420 FHPSKESVDS AIGDVLAKPW LPLPLGLKPP SMDSVMMELQ RQGVPKVPPS CA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20570.1 | 4e-84 | G2-like family protein |