PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON44012.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 415aa MW: 46772 Da PI: 5.2037

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON44012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	80.1	3.1e-25	81	163	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rr ++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk + + k + +s +++y+++le PON44012.1 81 WVQEETRSLIGFRRGVDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKARYQVKVG--SRSAKMSYYEDLE 163 ****************************************************************9997..45568***998 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MYLSEKTRPV DFYKERGGGG GGTGEEEESD RDMLMEEVVA NGGLAPPQHR NQTQNQMIIG 60 ENSSGGEEHE VKAPKKRAET WVQEETRSLI GFRRGVDGLF NTSKSNKHLW EQISSKMREK 120 GFDRSPTMCT DKWRNLLKEF KKARYQVKVG SRSAKMSYYE DLEELLRDRN KNNSATTATA 180 TATATTAAVA ATYKSQTPPK VDSFIHFSDK GLEDASIPFG PIETTDRSAV NLERRLDHEG 240 DPLAIAAADA VVANEVPPPW NWREAPDNGT ENQSSYCGRI ITVKLGEYSR RIGIEGTSDA 300 IKEAIKSGFR IRTKRAFWLE DEDNVVRSLD RDMPQGNYTL HLDEGITIKL CFYDESNRGS 360 VREEAITLYT EDDFRDFLTR RGFTGLRELG SYRCVDTLDD LQSGAMYQGV RLLVD

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MYLSEKTRPV DFYKERGGGG GGTGEEEESD RDMLMEEVVA NGGLAPPQHR NQTQNQMIIG  60
ENSSGGEEHE VKAPKKRAET WVQEETRSLI GFRRGVDGLF NTSKSNKHLW EQISSKMREK  120
GFDRSPTMCT DKWRNLLKEF KKARYQVKVG SRSAKMSYYE DLEELLRDRN KNNSATTATA  180
TATATTAAVA ATYKSQTPPK VDSFIHFSDK GLEDASIPFG PIETTDRSAV NLERRLDHEG  240
DPLAIAAADA VVANEVPPPW NWREAPDNGT ENQSSYCGRI ITVKLGEYSR RIGIEGTSDA  300
IKEAIKSGFR IRTKRAFWLE DEDNVVRSLD RDMPQGNYTL HLDEGITIKL CFYDESNRGS  360
VREEAITLYT EDDFRDFLTR RGFTGLRELG SYRCVDTLDD LQSGAMYQGV RLLVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-148	Trihelix family protein