PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON43354.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 219aa    MW: 24508.4 Da    PI: 6.6973
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON43354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.4e-053860123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++C++ F++   L  H++ H
  PON43354.1 38 YECTYCKRGFTNAQALGGHMNIH 60
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MESEKQGLSS ETSSSSEEND HRSEGQVVNE SRGAKRSYEC TYCKRGFTNA QALGGHMNIH  60
RKDRAKAKQH SSASHIHSHH HHELAEIAVA ASTFMTPFPS QSTAAWSMYQ PPSSVAETHQ  120
RNYNNMYFHQ PSTYGGTNFG NSSTYYGSDY YNHEFGSRSS SVTDHSLTMN EELLGANLSL  180
RMSSTSSSHL DDYEARRGSL MRHNSDEVDL ELRLGHGHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.12e-14C2H2 family protein