PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON43353.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 287aa    MW: 32168.8 Da    PI: 8.6754
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON43353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.0001285107123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+ C++ F++   L  H+++H
  PON43353.1  85 YTCSFCKREFRSAQALGGHMNVH 107
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MERTSWGNMN NMKEYRRANG SSSSTRSSLD TIRSSDNSNN NNNMMVIKKI NPKLAEDHSS  60
WKANNYEEAE EDYMINGFSW PPRSYTCSFC KREFRSAQAL GGHMNVHRKD RARLRQSPPR  120
DHGGYGTIFN LNNPNSSPNP NFSSPFSSVS TRLPPLIPYS PLSSNLASPP SLSSLSYSPF  180
FVAKNSSYEN KKCPWTTSME CHTEVILDHS LIMTTKGSEL AKTIKNKQSL NYGVGETKCF  240
TEKDMFKSLN NAETANSTVR LDLEIGLLGD SKTDGPDLDL ELRLGYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.11e-25C2H2 family protein