PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON43246.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 343aa    MW: 38744.6 Da    PI: 8.3204
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON43246.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.54.9e-13213259455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h+  ErrRRd+i +++ +L+ l+P++      K +Ka+iL  A+ Y+k Lq
  PON43246.1 213 LHSLSERRRRDKISKKMRTLQALIPNC-----NKADKASILDDAIVYLKALQ 259
                 5999**********************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MEEFVELVWE NDEIVRRRPS TFVLSQRGST VAAVGGDEGR MLYKKIDHHQ TNTTPTRNVF  60
ELFSSPTQTQ HRQLASADHS DHRQRPPLLN LIKTSTSPHD HHQQPKTVKP PLPVDHAMYL  120
VPDDHDHDDR QTSVLDQDHQ NYSYASCNHS QNQEEALVPS INSGGASNVH HLPNALHGVE  180
QEQEQDQEPL TLTKRVPPLR ATRAKRDSPA TRLHSLSERR RRDKISKKMR TLQALIPNCN  240
KADKASILDD AIVYLKALQL QVQMMSTRTG LNLTNPMVLP NNGALVPHLS YFSPMPPITS  300
RLGVQMFGFP VPASQPSFMP WHVPPSLHVP SLQTPFTYST QNN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218223ERRRRD
2219224RRRRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.22e-25bHLH family protein