PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON43162.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 253aa MW: 27930.9 Da PI: 4.9984 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1.1e-17 | 66 | 115 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a++ ++g PON43162.1 66 SFRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALTIKG 115 69****998.**********843...6**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MKEPVVLVNQ DWDFPTSSSS SSSQSPELVL KPSKKISKLR RISTNTTTTT DPHDSIRDGE 60 KHQTTSFRGV RMRQWGKWVS EIREPRKKSR IWLGTFPTAE MAARAHDVAA LTIKGRSAYL 120 NFPELAPELP RPTSSSPKDI QAAAAKAAAY CTNYSTTTTT KTTTSEAGDD DQTASSEAAM 180 TAGEASLSNS STSRLSVVDN DDDTFFDLPD LLLDVCNHQN GEFCAYYAQW PVVEADSNGF 240 RLIDQESLAW EYC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 1e-43 | ERF family protein |