PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON43145.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HD-ZIP

Protein Properties

Length: 314aa MW: 35394.5 Da PI: 8.0913

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON43145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.4	5.8e-19	148	202	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ LAk+lgL rqV vWFqNrRa+ k PON43145.1 148 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 202 788899***********************************************98 PP
2	HD-ZIP_I/II	129.5	1.3e-41	148	237	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LEesF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l PON43145.1 148 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 237 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MTEKEDLGLS LSLSFPQNNR HPIQNNKLNL FAPSLSTTTS SSEPSSAFNV NNLHRKPSWN 60 DTFPSSTDRN SETYRVETRT FLRGIDVNRL PSTADCEDDA GVSSPNSTVS SVSGKRSERE 120 ANGDENENEM ERACSRGISD EEDGETSRKK LRLSKDQSAI LEESFKEHNT LNPKQKLALA 180 KQLGLRPRQV EVWFQNRRAR TKLKQTEVDC EFLKRCCENL TEENRRLQKE VQELRALKLS 240 PQFYMQMTPP TTLTMCPSCE RVAVPPSTSA AATEARVHHH HPMGPAHPRP IPIGPWAAAT 300 PISHRPFDAL HPRN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	153	SRKKLRL
2	197	205	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	1e-109	HD-ZIP family protein